ggKbase home page

ar4r2_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 50 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_213_1
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..607)
DNA (606bp) protein (202aa)
Transposase insI for insertion sequence element IS30B/C/D id=4699897 bin=GWC2_Deltaproteobacteria_56_8 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
transposase
Tax=CG_Kuenen_02
ar4r2_scaffold_213_2
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(701..1564)
DNA (864bp) protein (288aa)
Radical SAM domain protein n=2 Tax=Peptostreptococcus anaerobius RepID=L1MRZ5_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EKX94027.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
radical SAM additional 4Fe4S-binding domain-containing protein
ar4r2_scaffold_213_3
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(1570..3870)
DNA (2301bp) protein (767aa)
Glycosyl transferase group 1 id=3514600 bin=GWF2_OP3_38_59 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159 rbh
radical SAM protein
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
ar4r2_scaffold_213_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3863..6031)
DNA (2169bp) protein (723aa)
Glycosyl transferase group 1 id=3514600 bin=GWF2_OP3_38_59 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
group 1 glycosyl transferase
Tax=RBG_13_Woesearchaeota_36_6_curated
ar4r2_scaffold_213_5
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(6024..7616)
DNA (1593bp) protein (531aa)
Asparagine synthetase id=3514591 bin=GWF2_OP3_38_59 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
putative glycosyl transferase
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
ar4r2_scaffold_213_6
unknown

Not on your lists

7623..9182
DNA (1560bp) protein (520aa)

This feature has no annotations

ar4r2_scaffold_213_7
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

9218..10198
DNA (981bp) protein (327aa)
Radical SAM domain protein id=3514619 bin=GWF2_OP3_38_59 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Radical SAM domain-containing protein
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
ar4r2_scaffold_213_8
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

10209..11144
DNA (936bp) protein (312aa)
Radical SAM domain protein n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0SW24_9DELT
Tax=CG_Omnitr_01
ar4r2_scaffold_213_9
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

11135..12076
DNA (942bp) protein (314aa)
Fe-S oxidoreductase n=1 Tax=Clostridium tyrobutyricum RepID=UPI00035EB374
radical SAM domain protein
Tax=CG_Omnitr_01
ar4r2_scaffold_213_10
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

12084..13214
DNA (1131bp) protein (377aa)
Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MSS0_SACVD
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
ar4r2_scaffold_213_11
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

13291..14112
DNA (822bp) protein (274aa)
Radical SAM domain protein id=3514743 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Fe-S oxidoreductase
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
ar4r2_scaffold_213_12
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

14116..15204
DNA (1089bp) protein (363aa)
Radical SAM domain protein n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MCE4_CALMQ
radical SAM domain-containing protein
Tax=CG_Omnitr_01
ar4r2_scaffold_213_13
unknown

Not on your lists

comp(15201..15920)
DNA (720bp) protein (240aa)

This feature has no annotations

ar4r2_scaffold_213_14
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16060..16992
DNA (933bp) protein (311aa)
4Fe-4S single cluster domain / radical SAM additional 4Fe4S-binding SPASM domain multi-domain protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R9F1_9FIRM
radical SAM superfamily protein
Tax=CG_Delta_02
ar4r2_scaffold_213_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(16995..17408)
DNA (414bp) protein (138aa)
Tax=CG_GN02-01
ar4r2_scaffold_213_16

Not on your lists

comp(17477..18403)
DNA (927bp) protein (309aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Pseudouridine synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ39_9BACT rbh
RluA family pseudouridine synthase
ar4r2_scaffold_213_17

Not on your lists

comp(18422..18826)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G973_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26674.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_213_18
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

19017..20429
DNA (1413bp) protein (471aa)
Putative transcription regulator n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FX12_9BACT rbh
cell envelope-related transcriptional attenuator
Tax=CG_GN02-02
ar4r2_scaffold_213_19
ACD78, Gracilibacteria, Bacteria

Not on your lists

20445..23696
DNA (3252bp) protein (1084aa)
putative penicillin-binding protein 1A id=123497 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein
Tax=ACD78
ar4r2_scaffold_213_20

Not on your lists

23857..25167
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BC03_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66328.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tapB; type IV pilus assembly protein TapB rbh
ar4r2_scaffold_213_21
unknown

Not on your lists

25189..25371
DNA (183bp) protein (61aa)

This feature has no annotations

ar4r2_scaffold_213_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

25512..26069
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6W6_9BACT
Tax=CG_GN02-01
ar4r2_scaffold_213_23
unknown

Not on your lists

26041..26241
DNA (201bp) protein (67aa)

This feature has no annotations

ar4r2_scaffold_213_24
RBG_16_OD1_47_10_curated, Parcubacteria, Bacteria

Not on your lists

26258..27757
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037190AB rbh
His-Xaa-Ser system radical SAM maturase HxsB rbh
Tax=RBG_16_OD1_47_10_curated
ar4r2_scaffold_213_25
GWA2_Elusimicrobia_51_34_curated, Elusimicrobia, Bacteria

Not on your lists

27785..28222
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=4788549 bin=GWA2_Elusimicrobia_51_34 species=Bombyx mori genus=Bombyx taxon_order=Lepidoptera taxon_class=Insecta phylum=Arthropoda tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_51_34_curated
ar4r2_scaffold_213_26
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28231..29160
DNA (930bp) protein (310aa)
Radical SAM domain protein id=2138245 bin=GWB2_Elusimicrobium_63_22 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
putative Fe-S oxidoreductase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
ar4r2_scaffold_213_27
unknown

Not on your lists

29153..29965
DNA (813bp) protein (271aa)

This feature has no annotations

ar4r2_scaffold_213_28
unknown

Not on your lists

29953..30720
DNA (768bp) protein (256aa)

This feature has no annotations

ar4r2_scaffold_213_29
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

30727..31620
DNA (894bp) protein (298aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J7D4_MARPK
arylsulfatase regulator
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:AEX85326.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
ar4r2_scaffold_213_30

Not on your lists

31604..32488
DNA (885bp) protein (295aa)
Radical SAM domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTG3_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KKN01867.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
radical SAM protein
Displaying items 1-30 of 50 in total

View Taxonomy