ggKbase home page

AR1-0.1_scaffold_56

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_56_1
unknown

Not on your lists

1..192
DNA (192bp) protein (64aa)

This feature has no annotations

AR1-0.1_scaffold_56_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(289..1275)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE73_9PROT
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
AR1-0.1_scaffold_56_3

Not on your lists

comp(1289..2533)
DNA (1245bp) protein (415aa)
hypothetical protein; K07133 id=3350 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE15864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
AR1-0.1_scaffold_56_4
unknown

Not on your lists

comp(2599..3885)
DNA (1287bp) protein (429aa)

This feature has no annotations

AR1-0.1_scaffold_56_5
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3911..4633)
DNA (723bp) protein (241aa)
CRISPR-associated RAMP protein, Csm3 family n=1 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NWD7_TRES6
Csm3 family CRISPR-associated RAMP protein
CRISPR-associated RAMP protein, Csm3 family {ECO:0000313|EMBL:AEB15058.1}; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
AR1-0.1_scaffold_56_6
unknown

Not on your lists

comp(4656..5198)
DNA (543bp) protein (181aa)

This feature has no annotations

AR1-0.1_scaffold_56_7
Caminibacter mediatlanticus, Caminibacter, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5201..6886)
DNA (1686bp) protein (562aa)
CRISPR-associated protein, Csm1 family n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE76_9PROT
CRISPR-associated protein, Csm1 family {ECO:0000313|EMBL:EDM23134.1}; TaxID=391592 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Caminibacter.;" source="Caminibacter mediatlanticus TB-2.;"
CRISPR-associated protein, Csm1 family
AR1-0.1_scaffold_56_8
unknown

Not on your lists

comp(6894..7646)
DNA (753bp) protein (251aa)

This feature has no annotations

AR1-0.1_scaffold_56_9
unknown

Not on your lists

comp(7787..8161)
DNA (375bp) protein (125aa)

This feature has no annotations

AR1-0.1_scaffold_56_10
unknown

Not on your lists

comp(8197..8538)
DNA (342bp) protein (114aa)

This feature has no annotations

AR1-0.1_scaffold_56_11
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(8626..11226)
DNA (2601bp) protein (867aa)
hth:HTH_0024 nrdA; ribonucleotide reductase alpha subunit; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=84598 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i rbh
hypothetical protein
Tax=CG_GN02-02
AR1-0.1_scaffold_56_12
ACD3, Gracilibacteria, Bacteria

Not on your lists

11588..12994
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F9F6_9BACT
fimbrial protein pilin
Tax=ACD3
AR1-0.1_scaffold_56_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

13023..14429
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GWM0_9BACT
General secretion pathway protein G
Tax=ACD3
AR1-0.1_scaffold_56_14
unknown

Not on your lists

14497..16758
DNA (2262bp) protein (754aa)

This feature has no annotations

AR1-0.1_scaffold_56_15
ACD80, SR1, Bacteria

Not on your lists

17335..19341
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ52_9BACT
fimbrial protein pilin
Tax=ACD80
AR1-0.1_scaffold_56_16

Not on your lists

19409..20968
DNA (1560bp) protein (520aa)
hypothetical protein id=132374 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25459.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_56_17

Not on your lists

20976..23282
DNA (2307bp) protein (769aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=69570 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66741.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Penicillin-binding protein, transpeptidase protein
AR1-0.1_scaffold_56_18
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

23294..23884
DNA (591bp) protein (197aa)
Maf-like protein maf n=1 Tax=Clostridium tetani 12124569 RepID=U6EZS8_CLOTA
Septum formation protein Maf {ECO:0000313|EMBL:KKP58443.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
maf; Maf-like protein
AR1-0.1_scaffold_56_19
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23896..24684
DNA (789bp) protein (263aa)
UPI0003D02B2B related cluster n=1 Tax=unknown RepID=UPI0003D02B2B
hypothetical protein
Tax=BJP_08E140C01_Falkowbacteria_33_19
AR1-0.1_scaffold_56_20
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

24671..25108
DNA (438bp) protein (146aa)
Alanine racemase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LNI2_9SPIR
hypothetical protein
Tax=BJP_08E140C01_Falkowbacteria_33_19
AR1-0.1_scaffold_56_21
ACD78, Gracilibacteria, Bacteria

Not on your lists

25153..26931
DNA (1779bp) protein (593aa)
seg 22..39 id=123851 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=ACD78
AR1-0.1_scaffold_56_22
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26943..28187
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=3893035 bin=GWF2_Bacteroidetes_33_38 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
peptidase M48
Tax=GWA2_Bacteroidetes_31_9_curated
AR1-0.1_scaffold_56_23
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28251..29129
DNA (879bp) protein (293aa)
Ion transport protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9K2_PEDSD
Potassium voltage-gated channel subfamily KQT {ECO:0000313|EMBL:KGL63675.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
Ion transport protein
AR1-0.1_scaffold_56_24

Not on your lists

comp(29113..29850)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AFB8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66645.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA polymerase III delta
AR1-0.1_scaffold_56_25
unknown

Not on your lists

comp(29804..30673)
DNA (870bp) protein (290aa)

This feature has no annotations

AR1-0.1_scaffold_56_26
unknown

Not on your lists

comp(30791..31039)
DNA (249bp) protein (83aa)

This feature has no annotations

AR1-0.1_scaffold_56_27
unknown

Not on your lists

31222..31395
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 27 items

View Taxonomy