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bjp_ig2158_scaffold_3446

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3446_trna_1
unknown

Not on your lists

comp(282..355)
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_3446_16S_1
unknown

Not on your lists

comp(499..2812)
DNA (2314bp)
Cloroflexi, best hits uncultured - not long sequence! Jill Banfield (12/9/14)
bjp_ig2158_scaffold_3446_1
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(575..1159)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
# 582980 # 583507 # 1 # ;gc_cont=0.511 id=18315045 bin=Nanosalinarum tax=Nanosalinarum
bjp_ig2158_scaffold_3446_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3411..4013)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3J0_CALAS
recR; recombination protein RecR; K06187 recombination protein RecR Tax=RBG_16_RIF_CHLX_72_14_curated
recR; recombination protein RecR
bjp_ig2158_scaffold_3446_3
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4032..4403)
DNA (372bp) protein (124aa)
Nucleoid-associated protein Dred_0043 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=Y043_DESRM
hypothetical protein
Nucleoid-associated protein Dred_0043 {ECO:0000255|HAMAP-Rule:MF_00274}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomac
bjp_ig2158_scaffold_3446_4
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4457..6127)
DNA (1671bp) protein (557aa)
DNA polymerase III gamma and tau subunit n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3J2_CALAS rbh
dnaX; DNA polymerase III subunit gamma and tau
DNA polymerase III gamma and tau subunit {ECO:0000313|EMBL:BAL99829.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aeroph
bjp_ig2158_scaffold_3446_5
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

6179..7882
DNA (1704bp) protein (568aa)
hypothetical protein Tax=CG_Anaero_02
bjp_ig2158_scaffold_3446_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8194..8382
DNA (189bp) protein (63aa)
Sec-independent protein translocase protein TatA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGM4_THEPS
twin-arginine translocation protein TatA/E; K03116 sec-independent protein translocase protein TatA Tax=CG_Anaero_02
tatA; twin-arginine translocation protein TatA
bjp_ig2158_scaffold_3446_7
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

8613..8798
DNA (186bp) protein (62aa)
hypothetical protein Tax=CG_Elusi_03
bjp_ig2158_scaffold_3446_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

8758..9207
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=4012462 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
bjp_ig2158_scaffold_3446_9
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

9355..9558
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGS1_ROSCS
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
bjp_ig2158_scaffold_3446_10
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

9569..9991
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037835E9
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
bjp_ig2158_scaffold_3446_11
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

9997..10416
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002DD22BB
restriction endonuclease Tax=CG_Anaero_02
HNH endonuclease
bjp_ig2158_scaffold_3446_12
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

10574..10891
DNA (318bp) protein (106aa)
hypothetical protein Tax=CG_Anaero_01
Putative uncharacterized protein id=1975834 bin=GWD2_Desulfuromonadales_54_10 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
bjp_ig2158_scaffold_3446_13
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

10888..11205
DNA (318bp) protein (106aa)
Xre family DNA-binding protein; K07726 putative transcriptional regulator Tax=CG_Anaero_01
Xre family DNA-binding protein id=4390871 bin=GWF2_Geobacter_54_21 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Xre family DNA-binding protein
bjp_ig2158_scaffold_3446_14
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

11869..12375
DNA (507bp) protein (169aa)
id=1731755 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
bjp_ig2158_scaffold_3446_15
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

12515..14494
DNA (1980bp) protein (660aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2); K00198 carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.99.2] Tax=RBG_13_Chloroflexi_66_10_curated
Carbon-monoxide dehydrogenase, catalytic subunit id=1731754 bin=GWD2_Chloroflexi_49_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
acetyl-CoA decarbonylase/synthase delta subunit
bjp_ig2158_scaffold_3446_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14648..17596
DNA (2949bp) protein (983aa)
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169); K14138 carbon monoxide dehydrogenase / acetyl-CoA synthase subunit alpha [EC:1.2.7.4 1.2.99.2 2.3.1.169] Tax=C
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit id=1731740 bin=GWD2_Chloroflexi_49_16 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
bjp_ig2158_scaffold_3446_17
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17795..18073
DNA (279bp) protein (93aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZ31_9DELT
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFK11220.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
protein of unknown function DUF497
bjp_ig2158_scaffold_3446_18
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18042..18350
DNA (309bp) protein (103aa)
Putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZ32_9DELT
Putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFK11203.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="del
hypothetical protein
bjp_ig2158_scaffold_3446_19
unknown

Not on your lists

18538..18801
DNA (264bp) protein (88aa)

This feature has no annotations

bjp_ig2158_scaffold_3446_20
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18785..19204
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEY5_THEPS
PilT-like protein
bjp_ig2158_scaffold_3446_21
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

19464..19778
DNA (315bp) protein (105aa)
Tax=CG_Arma_01
bjp_ig2158_scaffold_3446_22
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

19772..20023
DNA (252bp) protein (84aa)
id=14626989 Tax=RBG_16_Chloroflexi_57_9_curated
id=14626989 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
bjp_ig2158_scaffold_3446_23
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

20065..20346
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C805_DESTA
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
bjp_ig2158_scaffold_3446_24

Not on your lists

20385..20663
DNA (279bp) protein (93aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BI92_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48500.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2158_scaffold_3446_25
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

20908..21219
DNA (312bp) protein (104aa)
Tax=CG_Anaero_02
bjp_ig2158_scaffold_3446_26
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

21221..21646
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z264_9GAMM
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
bjp_ig2158_scaffold_3446_27
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

21650..22144
DNA (495bp) protein (165aa)
Tax=CG_Anaero_02
bjp_ig2158_scaffold_3446_28
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22373..22693
DNA (321bp) protein (107aa)
nucleotidyltransferase (EC:2.7.7.-) Tax=CG_Anaero_02
nucleotidyltransferase (EC:2.7.7.-)
Nucleotidyltransferase n=1 Tax=Anabaena sp. 90 RepID=K7W3C8_9NOST
Displaying items 1-30 of 34 in total

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