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bjp_ig2158_scaffold_3239

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3239_1
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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74..2443
DNA (2370bp) protein (790aa)
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=RBG_13_Nitrospirae_43_8_curated
(NiFe) hydrogenase maturation protein HypF id=1955327 bin=GWB2_Nitrospirae_rel_47_37 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
(NiFe) hydrogenase maturation protein HypF
bjp_ig2158_scaffold_3239_2
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2440..3510
DNA (1071bp) protein (357aa)
Hydrogenase expression/formation protein HypD id=2170868 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
hypD; hydrogenase expression/formation protein HypD
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_3
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3514..4524
DNA (1011bp) protein (337aa)
Hydrogenase expression/formation protein HypE id=4762399 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
hypE; hydrogenase expression/formation protein HypE
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_4
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4559..5305
DNA (747bp) protein (249aa)
Pyridoxine 5'-phosphate synthase id=4576626 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
pdxJ; pyridoxine 5'-phosphate synthase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_5
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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5329..5700
DNA (372bp) protein (124aa)
Holo-[acyl-carrier-protein] synthase id=4576569 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Holo-(acyl-carrier-protein) synthase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_6
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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5743..7320
DNA (1578bp) protein (526aa)
Bifunctional NAD(P)H-hydrate repair enzyme Nnr id=4127412 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
YjeF family protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_7
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7389..7859
DNA (471bp) protein (157aa)
CBS domain containing membrane protein id=3414557 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
CBS domain containing membrane protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_8
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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7834..8274
DNA (441bp) protein (147aa)
ATPase YjeE, predicted to have essential role in cell wall biosynthesis id=3414556 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
conserved hypothetical nucleotide-binding protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_9
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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8249..9100
DNA (852bp) protein (284aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase id=3414555 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_10
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9085..9816
DNA (732bp) protein (244aa)
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase, family 4 id=3414553 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_11
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9811..10968)
DNA (1158bp) protein (386aa)
ABC-3 protein id=3055490 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
ABC-3 protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_trna_1
unknown

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9974..10060
DNA (87bp)
transferRNA
bjp_ig2158_scaffold_3239_12
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(10968..11744)
DNA (777bp) protein (259aa)
Manganese transport system ATP-binding protein MntA id=3055487 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
manganese transport system ATP-binding protein MntA
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_13
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11741..12679)
DNA (939bp) protein (313aa)
ABC-type metal ion transporter, periplasmic subunit id=3055484 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
metal ABC transporter substrate-binding protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3239_14
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12739..13950
DNA (1212bp) protein (404aa)
Permeases of the major facilitator superfamily id=4044130 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
major facilitator superfamily protein
Tax=BJP_IG2158_Nitrospirales_45_240
Displaying 15 items

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