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bjp_ig2158_scaffold_3382

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3382_1
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1..114
DNA (114bp) protein (38aa)
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_2
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(497..4651)
DNA (4155bp) protein (1385aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=4674040 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_3
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4653..8477)
DNA (3825bp) protein (1275aa)
rpoB; DNA-directed RNA polymerase subuit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4674041 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_4
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(8420..8983)
DNA (564bp) protein (188aa)
50S ribosomal protein L7/L12 id=3619739 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
rplL; 50S ribosomal protein L7/L12
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_5
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(9008..9436)
DNA (429bp) protein (143aa)
Ribosomal protein L10 id=3619601 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
50S ribosomal protein L10
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_6
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(9825..10514)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 id=3619597 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
rplA; 50S ribosomal protein L1
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_7
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(10528..10956)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 id=3619593 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
rplK; 50S ribosomal protein L11
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_8
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10992..11519)
DNA (528bp) protein (176aa)
Transcription antitermination protein nusG id=3619589 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
nusG; transcription termination/antitermination factor NusG
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_9
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11525..11710)
DNA (186bp) protein (62aa)
Preprotein translocase, SecE subunit id=4674078 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
secE; preprotein translocase subunit SecE
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_trna_1
unknown

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comp(11734..11807)
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_3382_10
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(11893..12045)
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=4 Tax=Leptospirillum RepID=J9ZBF4_LEPFM
rpmG; 50S ribosomal protein L33
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_3382_11
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(12042..12143)
DNA (102bp) protein (34aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=EFTU_BDEBA
tuf; elongation factor Tu Tax=CG_Nitrosp_02
Displaying 12 items

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