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bjp_ig2158_scaffold_2052

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_2052_1
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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135..695
DNA (561bp) protein (187aa)
Segregation and condensation protein B id=3215408 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
scpB; segregation and condensation protein B
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_2
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

692..1657
DNA (966bp) protein (322aa)
endopeptidase LytE (EC:3.4.-.-)
Probable endopeptidase LytE id=3215400 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_3
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1701..3668)
DNA (1968bp) protein (656aa)
Molybdenum cofactor synthesis domain protein id=3731043 bin=GWF2_Nitrospirae_44_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
molybdenum cofactor synthesis domain-containing protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_4
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3697..4875)
DNA (1179bp) protein (393aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase id=2811571 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_5
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4899..5249)
DNA (351bp) protein (117aa)
Response regulator id=2811566 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
response regulator
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_6
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5246..7339)
DNA (2094bp) protein (698aa)
Sensor histidine kinase, putative id=2811557 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
sensor histidine kinase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_7
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7377..8846)
DNA (1470bp) protein (490aa)
glycogen synthase (EC:2.4.1.21)
Glycogen synthase id=3967299 bin=GWF2_Nitrospirae_44_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_8
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8843..9841)
DNA (999bp) protein (333aa)
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase id=3967301 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_9
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10003..10410)
DNA (408bp) protein (136aa)
OB-fold nucleic acid binding domain protein id=2096975 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
OB-fold nucleic acid binding domain-containing protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_10
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10442..10903)
DNA (462bp) protein (154aa)
Putative uncharacterized protein id=3721296 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_11
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10925..11797)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIR5_THEYD
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_12
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11856..12245)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=2631187 bin=GWA2_Elusimicrobia_66_18 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
iron-molybdenum cluster-binding family protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_13
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12705..13229)
DNA (525bp) protein (175aa)
Putative uncharacterized protein id=3448875 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_14
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13219..14262)
DNA (1044bp) protein (348aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase id=3448876 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_15
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14278..14787)
DNA (510bp) protein (170aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase id=3448877 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_16
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15183..15893
DNA (711bp) protein (237aa)
Serine/threonine protein kinase with PASTA sensor(S) id=4854784 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
serine/threonine protein kinase with PASTA sensor(s)
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_17
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15886..16545
DNA (660bp) protein (220aa)
Ribulose-phosphate 3-epimerase id=2205463 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ribulose-phosphate 3-epimerase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_18
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16523..17608
DNA (1086bp) protein (362aa)
Tetratricopeptide repeat domain protein id=4854788 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
tetratricopeptide repeat domain-containing protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_19
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17808..18350
DNA (543bp) protein (181aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4854790 bin=GWC2_CP_Nitrospirae-rel_42_7 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
CDP-alcohol phosphatidyltransferase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_20
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18337..19527
DNA (1191bp) protein (397aa)
PDZ domain protein id=3929623 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_21
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

19563..20387
DNA (825bp) protein (275aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase id=3929620 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_22
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20515..20970
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=3929602 bin=GWF2_Nitrospirae_44_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_23
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20945..21412
DNA (468bp) protein (156aa)
Putative uncharacterized protein id=2636405 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_24
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

21412..22134
DNA (723bp) protein (241aa)
Unclassified ABC-type transport system, ATPase component id=2636409 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
ABC transporter ATPase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_25
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

22135..23571
DNA (1437bp) protein (479aa)
RNA polymerase sigma-54 factor id=2636413 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
rpoN; RNA polymerase sigma-54 factor
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_26
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

23633..24157
DNA (525bp) protein (175aa)
SSU ribosomal protein S30P id=2636416 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
30S ribosomal protein S30P
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_27
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24169..25065
DNA (897bp) protein (299aa)
UPF0042 nucleotide-binding protein THEYE_A0235 id=2636419 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_28
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

25114..25551
DNA (438bp) protein (146aa)
CBS domain protein id=2925275 bin=GWC2_Nitrospirae-rel_56_14 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_29
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(25697..26038)
DNA (342bp) protein (114aa)
id=4703627 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_2052_30
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(26095..26169)
DNA (75bp) protein (25aa)
Tax=BJP_IG2158_Nitrospirales_45_240
Displaying 30 items

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