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bjp_ig2158_scaffold_4258

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_4258_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(2..334)
DNA (333bp) protein (111aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF4_ANASK
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
UBA/THIF-type NAD/FAD binding protein
bjp_ig2158_scaffold_4258_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(442..1560)
DNA (1119bp) protein (373aa)
N-ethylmaleimide reductase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIZ0_AZOBR rbh
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AIB12552.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum br
bjp_ig2158_scaffold_4258_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(1631..2059)
DNA (429bp) protein (143aa)
MarR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
MarR family transcriptional regulator id=12557865 bin=CNBR_ACIDO species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SC4A7.26; MarR family transcriptonal regulator
bjp_ig2158_scaffold_4258_4
unknown

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2463..2720
DNA (258bp) protein (86aa)

This feature has no annotations

bjp_ig2158_scaffold_4258_5

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2681..3169
DNA (489bp) protein (163aa)
hypothetical protein id=99348 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD47029.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2158_scaffold_4258_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3350..3967)
DNA (618bp) protein (206aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative capsular biosynthesis sugar kinase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L027_9BACT id=5223765 bin=16ft_combo_ws3_JS1 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
kinase, galactokinase/mevalonate kinase
bjp_ig2158_scaffold_4258_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3975..4349)
DNA (375bp) protein (125aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=GWC2_Gemmatimonadetes_71_10_curated
D-glycero-D-manno-heptose 7-phosphate kinase n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4Z4N9_9MYCO
GHMP kinase
bjp_ig2158_scaffold_4258_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4346..5788)
DNA (1443bp) protein (481aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A8_GEMAT rbh
putative peptide ABC transporter substrate binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, periplasmic subunit
bjp_ig2158_scaffold_4258_9
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

5908..6825
DNA (918bp) protein (306aa)
Tax=CG_Anaero_04
bjp_ig2158_scaffold_4258_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6923..7903
DNA (981bp) protein (327aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EH22_CHLL2
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, integral membrane subunit
bjp_ig2158_scaffold_4258_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7896..8729
DNA (834bp) protein (278aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B0_GEMAT
putative peptide ABC transporter permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative peptide ABC transporter permease protein
bjp_ig2158_scaffold_4258_12
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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9219..10046
DNA (828bp) protein (276aa)
LuxR family two component transcriptional regulator Tax=RBG_16_Zixibacteria_53_22_curated
Putative two-component system response regulator id=4441976 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
two component LuxR family transcriptional regulator
bjp_ig2158_scaffold_4258_13
unknown

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10459..10821
DNA (363bp) protein (121aa)

This feature has no annotations

bjp_ig2158_scaffold_4258_14
unknown

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10917..11132
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 14 items

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