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bjp_ig2158_scaffold_4883

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_4883_1
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD08F5
Tax=BJP_IG2102_Porphyrobacter_62_18
bjp_ig2158_scaffold_4883_2
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(431..571)
DNA (141bp) protein (47aa)
Tax=BJP_IG2102_Porphyrobacter_62_18
bjp_ig2158_scaffold_4883_3
unknown

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comp(654..923)
DNA (270bp) protein (90aa)

This feature has no annotations

bjp_ig2158_scaffold_4883_4
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1045..1995)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E0H5_9GAMM
membrane protein Tax=RBG_16_Alphaproteobacteria_64_48_curated
MgtC family
bjp_ig2158_scaffold_4883_5
unknown

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comp(2066..3217)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C3CBC rbh
bjp_ig2158_scaffold_4883_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3354..6431)
DNA (3078bp) protein (1026aa)
Cation efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA57_GEMAT rbh
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:BAH39655.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
bjp_ig2158_scaffold_4883_7
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(6412..7530)
DNA (1119bp) protein (373aa)
RND family efflux transporter MFP subunit n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ4_9BACT
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:BAL53880.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Heavy metal efflux pump, CzcB family
bjp_ig2158_scaffold_4883_8
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7527..8753)
DNA (1227bp) protein (409aa)
transporter n=1 Tax=Comamonas testosteroni RepID=UPI000380ACA5
Heavy metal RND efflux outer membrane protein, CzcC family protein {ECO:0000313|EMBL:KFE71349.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; C
transporter
bjp_ig2158_scaffold_4883_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8873..9553
DNA (681bp) protein (227aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACF3_GEMAT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CDM64242.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
OmpR family two-component response regulator
bjp_ig2158_scaffold_4883_10
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9550..10953
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sou
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P533_STRVO
integral membrane sensor signal transduction histidine kinase
bjp_ig2158_scaffold_4883_11
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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11031..11330
DNA (300bp) protein (100aa)
sodium:proton antiporter n=1 Tax=Vibrio marinus RepID=UPI0003018DCA
nhaA; pH-dependent sodium/proton antiporter; K03313 Na+:H+ antiporter, NhaA family Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
nhaA; Na(+)/H(+) antiporter nhaA
Displaying 11 items

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