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bjp_ig2158_scaffold_2610

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_2610_1
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..305
DNA (303bp) protein (101aa)
bifunctional malic enzyme oxidoreductase/phosphotransacetylase (EC:1.1.1.40)
NADP-dependent malic enzyme n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FV92_PELBH
Tax=BJP_08E140C01_Roseovarius_63_250
bjp_ig2158_scaffold_2610_2
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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332..688
DNA (357bp) protein (119aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HHV9_RHOCA
Tax=BJP_08E140C01_Roseovarius_63_250
bjp_ig2158_scaffold_2610_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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685..1923
DNA (1239bp) protein (413aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
bjp_ig2158_scaffold_2610_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1920..2432
DNA (513bp) protein (171aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAH38822.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
bjp_ig2158_scaffold_2610_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2519..2962
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplM; 50S ribosomal protein L13
bjp_ig2158_scaffold_2610_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2959..3360
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsI; 30S ribosomal protein S9
bjp_ig2158_scaffold_2610_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3507..4397
DNA (891bp) protein (297aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT rbh
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S2
bjp_ig2158_scaffold_2610_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4523..5392
DNA (870bp) protein (290aa)
Elongation factor Ts n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z2_GEMAT
Elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemma
bjp_ig2158_scaffold_2610_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5392..6102
DNA (711bp) protein (237aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z1_GEMAT rbh
bjp_ig2158_scaffold_2610_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6099..6653
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z0_GEMAT
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
frr; ribosome recycling factor
bjp_ig2158_scaffold_2610_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6650..7396
DNA (747bp) protein (249aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimo
Isoprenyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT rbh
bjp_ig2158_scaffold_2610_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7406..8272
DNA (867bp) protein (289aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
bjp_ig2158_scaffold_2610_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8272..9375
DNA (1104bp) protein (368aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT rbh
bjp_ig2158_scaffold_2610_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9372..10721
DNA (1350bp) protein (450aa)
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=14627639 bin=bin7_NC10_sister species=Mucispirillum schaedleri genus=Mucispirillum taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
rseP; membrane-associated zinc metalloprotease (EC:3.4.24.-)
bjp_ig2158_scaffold_2610_15
unknown

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11210..12439
DNA (1230bp) protein (410aa)

This feature has no annotations

bjp_ig2158_scaffold_2610_16

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12684..13922
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=uncultured bacterium esnapd22 RepID=S5UBX1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGS49914.1}; TaxID=1366604 species="Bacteria; environmental samples.;" source="uncultured bacterium esnapd22.;"
bjp_ig2158_scaffold_2610_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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14172..14432
DNA (261bp) protein (87aa)
30S ribosomal protein S15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsO; 30S ribosomal protein S15
bjp_ig2158_scaffold_2610_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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14515..16596
DNA (2082bp) protein (694aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT rbh
Polyribonucleotide nucleotidyltransferase
bjp_ig2158_scaffold_2610_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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16599..17852
DNA (1254bp) protein (418aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT rbh
putative S16B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M16 domain protein
bjp_ig2158_scaffold_2610_20
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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17883..18089
DNA (207bp) protein (69aa)
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" so
Alanine dehydrogenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXY6_KYRT2
Displaying 20 items

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