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bjp_ig2158_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_437_1
unknown

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)

This feature has no annotations

bjp_ig2158_scaffold_437_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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355..1560
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38252.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_437_3
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1600..2430
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I6G3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ETA81810.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
hypothetical protein
bjp_ig2158_scaffold_437_4
unknown

Not on your lists

2427..2921
DNA (495bp) protein (165aa)

This feature has no annotations

bjp_ig2158_scaffold_437_5

Not on your lists

3160..3558
DNA (399bp) protein (133aa)
id=1250966 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Uncharacterized protein {ECO:0000313|EMBL:EQB63829.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
bjp_ig2158_scaffold_437_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3690..4346
DNA (657bp) protein (219aa)
OmpA/MotB domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG70_RHOM4
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ACY47626.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
bjp_ig2158_scaffold_437_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4343..4675
DNA (333bp) protein (111aa)
Nucleic acid binding, OB-fold, tRNA/helicase-type n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RV1_SOLUE id=5224764 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Nucleic acid binding, OB-fold, tRNA/helicase-type Tax=RBG_16_RIF_WS3X_71_46_curated
bjp_ig2158_scaffold_437_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4729..4989
DNA (261bp) protein (87aa)
Transglycosylase-associated family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N063_CORCM
Transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:AHG91953.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_437_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5006..5611)
DNA (606bp) protein (202aa)
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
ECF subfamily RNA polymerase sigma-70 factor
bjp_ig2158_scaffold_437_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5608..5760)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000363CD11
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91179.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_437_11
unknown

Not on your lists

comp(6308..6619)
DNA (312bp) protein (104aa)

This feature has no annotations

bjp_ig2158_scaffold_437_12
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(6786..7475)
DNA (690bp) protein (230aa)
LuxR family two component transcriptional regulator Tax=RBG_16_Zixibacteria_53_22_curated
Putative two-component response regulator id=4899269 bin=GWA2_OP3_52_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
two component LuxR family transcriptional regulator
bjp_ig2158_scaffold_437_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7833..8504
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003757CC5
protein of unknown function DUF305
Uncharacterized protein {ECO:0000313|EMBL:AHG91657.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_437_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8660..10657
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003692E5E rbh
LVIVD repeat-containing protein
LVIVD repeat-containing protein {ECO:0000313|EMBL:AHG91658.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_437_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10755..10943)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
bjp_ig2158_scaffold_437_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10940..11437)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035F632E
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
bjp_ig2158_scaffold_437_17
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11624..13702)
DNA (2079bp) protein (693aa)
1A family penicillin-binding protein; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] id=14624890 bin=bin5_DeltaP species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
1A family penicillin-binding protein; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=CSP1_8_Deltaproteobacteria
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-)
bjp_ig2158_scaffold_437_18
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(13827..14420)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBK5_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02643.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
bjp_ig2158_scaffold_437_19
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(14417..14872)
DNA (456bp) protein (152aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBK4_PHYMF
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAM02642.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycispha
bjp_ig2158_scaffold_437_20
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14869..15291)
DNA (423bp) protein (141aa)
DoxX family protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002485246
DoxX family protein
DoxX family protein, putative {ECO:0000313|EMBL:ABW26247.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain
bjp_ig2158_scaffold_437_21
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

15490..15798
DNA (309bp) protein (103aa)
Excinuclease ABC C subunit domain protein n=2 Tax=mine drainage metagenome RepID=T0ZD83_9ZZZZ
excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
excinuclease ABC subunit C
bjp_ig2158_scaffold_437_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15964..16536
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD43_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40420.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_437_23

Not on your lists

comp(16621..17562)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4332A
Uncharacterized protein {ECO:0000313|EMBL:AIA15414.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2158_scaffold_437_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17803..18390
DNA (588bp) protein (196aa)
PadR family transcriptional regulator n=1 Tax=Acetobacter pasteurianus RepID=UPI000319011C
PadR-like family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
padR; transcriptional regulator, PadR
bjp_ig2158_scaffold_437_25
unknown

Not on your lists

18439..18702
DNA (264bp) protein (88aa)

This feature has no annotations

bjp_ig2158_scaffold_437_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

18764..19726
DNA (963bp) protein (321aa)
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=12555058 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ABC transporter ATPase Tax=RBG_16_RIF_WS3X_71_46_curated
ABC transporter ATPase
bjp_ig2158_scaffold_437_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19719..20774
DNA (1056bp) protein (352aa)
integral membrane transport protein Tax=GWC2_Gemmatimonadetes_71_10_curated
multidrug ABC transporter permease id=12555059 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ABC multidrug efflux pump, inner membrane subunit
bjp_ig2158_scaffold_437_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21043..21468)
DNA (426bp) protein (142aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein id=14631647 bin=bin9_gal15 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
bjp_ig2158_scaffold_437_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21465..21761)
DNA (297bp) protein (99aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
bjp_ig2158_scaffold_437_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21892..22239
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E5928
transcriptional regulator, PadR-family
Transcriptional regulator, PadR-family {ECO:0000313|EMBL:AHG93724.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 85 in total

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