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bjp_ig2158_scaffold_439

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_439_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..532)
DNA (531bp) protein (177aa)
glpG protein n=1 Tax=Treponema primitia RepID=UPI0002554D77
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Peptidase S54, rhomboid domain protein
bjp_ig2158_scaffold_439_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(575..943)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000368E092
Cupin 2 conserved barrel domain protein
phospholipase C (plcA) Tax=RBG_16_Chloroflexi_63_12_curated
bjp_ig2158_scaffold_439_3
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(933..2438)
DNA (1506bp) protein (502aa)
Aromatic-L-amino-acid decarboxylase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K2I3_9BACT rbh
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:ELR73662.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechen
aromatic-L-amino-acid decarboxylase
bjp_ig2158_scaffold_439_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2438..3571)
DNA (1134bp) protein (378aa)
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein id=14428743 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
hypothetical protein
bjp_ig2158_scaffold_439_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3938..4471
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EA04E0
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
ECF subfamily RNA polymerase sigma-24 subunit
bjp_ig2158_scaffold_439_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4468..5100
DNA (633bp) protein (211aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_439_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5116..6054
DNA (939bp) protein (313aa)
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL61_ROSCS
htrA; putative serine protease HtrA Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_439_8
unknown

Not on your lists

6131..7117
DNA (987bp) protein (329aa)

This feature has no annotations

bjp_ig2158_scaffold_439_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7095..7511)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Fangia hongkongensis RepID=UPI00036951AC
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Fe(II) trafficking protein YggX
bjp_ig2158_scaffold_439_10
unknown

Not on your lists

comp(7713..7877)
DNA (165bp) protein (55aa)

This feature has no annotations

bjp_ig2158_scaffold_439_11

Not on your lists

comp(8123..8494)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM85502.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
bjp_ig2158_scaffold_439_12
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8491..11634)
DNA (3144bp) protein (1048aa)
CzcA family heavy metal efflux protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U333_MYXSD rbh
CzcA family heavy metal efflux protein rbh
CzcA family heavy metal efflux protein {ECO:0000313|EMBL:AGC43191.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
bjp_ig2158_scaffold_439_13
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11654..12844)
DNA (1191bp) protein (397aa)
RND family heavy metal efflux transporter MFP subunit n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6G0_MYXSD
RND family heavy metal efflux transporter MFP subunit
RND family heavy metal efflux transporter MFP subunit {ECO:0000313|EMBL:AGC43192.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae
bjp_ig2158_scaffold_439_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12841..14091)
DNA (1251bp) protein (417aa)
Outer membrane efflux protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4W6_MYXSD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AGC43193.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
bjp_ig2158_scaffold_439_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15083..15343)
DNA (261bp) protein (87aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_439_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15437..16432)
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H679_ANADF rbh
3-oxoacyl-(acyl-carrier-protein) synthase III
bjp_ig2158_scaffold_439_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16467..17198)
DNA (732bp) protein (244aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABK0_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39877.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
bjp_ig2158_scaffold_439_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17332..18546)
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative macrolide efflux ABC transporter permease
bjp_ig2158_scaffold_439_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18543..20096)
DNA (1554bp) protein (518aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
RND family efflux transporter MFP subunit
bjp_ig2158_scaffold_439_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20093..20848)
DNA (756bp) protein (252aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT rbh
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
bjp_ig2158_scaffold_439_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20845..22167)
DNA (1323bp) protein (441aa)
Putative outer membrane macrolide efflux protein n=2 Tax=Myxococcus RepID=Q1D4Q0_MYXXD id=5224473 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane macrolide efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
bjp_ig2158_scaffold_439_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22154..22576)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_439_23
unknown

Not on your lists

comp(22573..22908)
DNA (336bp) protein (112aa)

This feature has no annotations

bjp_ig2158_scaffold_439_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22908..23483)
DNA (576bp) protein (192aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase ECF-type sigma factor
bjp_ig2158_scaffold_439_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23480..24892)
DNA (1413bp) protein (471aa)
cardiolipin synthetase (EC:2.7.8.-)
Cardiolipin synthetase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094R1_STIAD rbh
phospholipase D/transphosphatidylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_439_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24889..25476)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
bjp_ig2158_scaffold_439_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25473..25868)
DNA (396bp) protein (132aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_439_28
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25943..26389)
DNA (447bp) protein (149aa)
peptidylprolyl isomerase n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002D5E019
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:AGN17529.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source=
bjp_ig2158_scaffold_439_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26717..27388)
DNA (672bp) protein (224aa)
nth; putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=379066 species="
Endonuclease III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R7_GEMAT
bjp_ig2158_scaffold_439_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27388..29127)
DNA (1740bp) protein (580aa)
DNA polymerase X family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R8_GEMAT rbh
DNA polymerase X family protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PHP domain protein
Displaying items 1-30 of 35 in total

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