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bjp_ig2158_scaffold_518

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_518_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4L7_ACIC5
hypC; hydrogenase assembly chaperone HypC/HupF
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ACO32712.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium cap
bjp_ig2158_scaffold_518_2
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(268..2598)
DNA (2331bp) protein (777aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003732644 rbh
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:AKG46809.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiam
(NiFe) hydrogenase maturation protein HypF
bjp_ig2158_scaffold_518_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2595..3263)
DNA (669bp) protein (223aa)
hydrogenase nickel incorporation protein HypB Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Hydrogenase accessory protein HypB id=3646101 bin=GWC2_Ignavibacteria_56_12 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hydrogenase nickel incorporation protein HypB
bjp_ig2158_scaffold_518_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3244..3501)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bjp_ig2158_scaffold_518_5
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3489..4001)
DNA (513bp) protein (171aa)
Periplasmically oriented, membrane-bound [NiFe]-hydrogenase maturation protease n=2 Tax=Geobacter metallireducens RepID=Q39QD2_GEOMG
hyaP; periplasmically oriented, membrane-bound [NiFe]-hydrogenase maturation protease
Periplasmically oriented, membrane-bound [NiFe]-hydrogenase maturation protease {ECO:0000313|EMBL:ABB33542.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
bjp_ig2158_scaffold_518_6
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3994..4626)
DNA (633bp) protein (211aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=1 Tax=Geobacter sp. (strain M18) RepID=E8WNQ5_GEOS8
Iron hydrogenase {ECO:0000313|EMBL:KIE41571.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
Ni/Fe-hydrogenase, b-type cytochrome subunit
bjp_ig2158_scaffold_518_7
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4734..6449)
DNA (1716bp) protein (572aa)
Nickel-dependent hydrogenase large subunit n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E3F2_GEOLS rbh
nickel-dependent hydrogenase large subunit
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:ACD95771.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="
bjp_ig2158_scaffold_518_8
Corynebacterium amycolatum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6436..7590)
DNA (1155bp) protein (385aa)
hydrogenase small subunit (EC:1.12.99.6)
Uptake hydrogenase small subunit {ECO:0000313|EMBL:EEB63829.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EEB63829.1};; TaxID=553204 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Cory
Ni/Fe hydrogenase n=1 Tax=Corynebacterium diphtheriae RepID=UPI00037A4EAA rbh
bjp_ig2158_scaffold_518_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7961..8395)
DNA (435bp) protein (145aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ10_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90881.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_518_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8522..9895)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A938_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF1446
bjp_ig2158_scaffold_518_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9892..12789)
DNA (2898bp) protein (966aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QVF5_CHLT3
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S8/S53 subtilisin kexin sedolisin
bjp_ig2158_scaffold_518_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12795..14432)
DNA (1638bp) protein (546aa)
putative acyl-CoA carboxylase beta subunit (EC:6.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative acyl-CoA carboxylase beta subunit (EC:6.4.1.-)
Putative acyl-CoA carboxylase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A939_GEMAT rbh
bjp_ig2158_scaffold_518_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14437..14865)
DNA (429bp) protein (143aa)
Putative isobutyryl-CoA mutase small subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A940_GEMAT
Methylmalonyl-CoA mutase domain-containing protein
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:AHG90884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_518_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14867..16042)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14425314 bin=bin1_lowGC species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
bjp_ig2158_scaffold_518_15
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16154..19588
DNA (3435bp) protein (1145aa)
Methylmalonyl-CoA mutase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXR8_CORCM rbh
sbm; methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AFE10307.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Co
bjp_ig2158_scaffold_518_16
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19658..20092)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRD1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EZH72378.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
bjp_ig2158_scaffold_518_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20195..21154)
DNA (960bp) protein (320aa)
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
putative transport system kinase
Putative transport system kinase {ECO:0000313|EMBL:BAH38752.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (
bjp_ig2158_scaffold_518_18
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21151..22497)
DNA (1347bp) protein (449aa)
magnesium transporter n=1 Tax=Pedobacter agri RepID=UPI000299E7E1 rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
magnesium transporter
bjp_ig2158_scaffold_518_19
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(22494..23693)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY55_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ91558.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
bjp_ig2158_scaffold_518_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23690..24850)
DNA (1161bp) protein (387aa)
CBS domain containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIR8_RHOMR
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
bjp_ig2158_scaffold_518_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24847..25278)
DNA (432bp) protein (144aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=379066 species="Bacteria; Ge
Endoribonuclease YbeY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein
bjp_ig2158_scaffold_518_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25282..26238)
DNA (957bp) protein (319aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT rbh
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_518_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(26235..28064)
DNA (1830bp) protein (610aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:BAH38757.1}; EC=6.1.1.12 {ECO:0000313|EMBL:BAH38757.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT rbh
bjp_ig2158_scaffold_518_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28390..29478
DNA (1089bp) protein (363aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT rbh
Ribosomal RNA large subunit methyltransferase N
bjp_ig2158_scaffold_518_25
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29484..30803
DNA (1320bp) protein (440aa)
Acyltransferase domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1V1_9DELT
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KIG17790.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
acyltransferase domain-containing protein
Displaying 25 items

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