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bjp_ig2158_scaffold_742

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_742_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3..572)
DNA (570bp) protein (190aa)
Ankyrin n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UA04_DEIML id=5225168 bin=16ft_combo_ws3_JS1 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ankyrin Tax=RBG_16_RIF_WS3X_71_46_curated
ankyrin
bjp_ig2158_scaffold_742_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

684..3527
DNA (2844bp) protein (948aa)
Peptidase S9 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B8_GEMAT rbh
peptidase S9 family protein
Peptidase S9 family protein {ECO:0000313|EMBL:AHG91190.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_742_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3949..5604)
DNA (1656bp) protein (552aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=5014560 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
bjp_ig2158_scaffold_742_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5636..5902)
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_742_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6190..6798
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
bjp_ig2158_scaffold_742_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6835..7677
DNA (843bp) protein (281aa)
Putative periplasmic solute-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DMZ9_SINAD rbh
periplasmic solute-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF178
bjp_ig2158_scaffold_742_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7793..8842
DNA (1050bp) protein (350aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT rbh
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
two-component response regulator
bjp_ig2158_scaffold_742_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8890..9900
DNA (1011bp) protein (337aa)
chemotaxis protein CheY n=1 Tax=Bradyrhizobium japonicum RepID=UPI000362A8C7
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
signal transduction histidine kinase
bjp_ig2158_scaffold_742_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9938..10237
DNA (300bp) protein (100aa)
Large-conductance mechanosensitive channel n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U5Q1_9ARCH
large conductance mechanosensitive channel protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
large conductance mechanosensitive channel protein
bjp_ig2158_scaffold_742_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10323..13214
DNA (2892bp) protein (964aa)
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88404.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TPR repeat-containing serine/threonin protein kinase id=24431878 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
bjp_ig2158_scaffold_742_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13252..14250)
DNA (999bp) protein (333aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protease HtpX homolog id=4169646 bin=GWA2_Ignavibacteria_55_11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Zn-dependent protease with chaperone function
bjp_ig2158_scaffold_742_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14247..14816)
DNA (570bp) protein (190aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
bjp_ig2158_scaffold_742_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14843..15406)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
bjp_ig2158_scaffold_742_14
unknown

Not on your lists

15527..15964
DNA (438bp) protein (146aa)

This feature has no annotations

bjp_ig2158_scaffold_742_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16409..17281)
DNA (873bp) protein (291aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_742_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17330..17959
DNA (630bp) protein (210aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_742_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

18166..18372
DNA (207bp) protein (69aa)
Putative cold-shock DNA-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDD7_ANADF
cold-shock DNA-binding domain-containing protein
cold shock DNA/RNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Nitrospirae_64_22_curated
bjp_ig2158_scaffold_742_18
unknown

Not on your lists

comp(18300..18899)
DNA (600bp) protein (200aa)

This feature has no annotations

bjp_ig2158_scaffold_742_19
RLO_PLX_64_10, Bacteria

Not on your lists

18982..20109
DNA (1128bp) protein (376aa)
ABC transporter substrate binding protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7U1C5_9DELT
putative Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
bjp_ig2158_scaffold_742_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20111..21799
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI000371B361
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis sensory transducer
bjp_ig2158_scaffold_742_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21957..22436)
DNA (480bp) protein (160aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_742_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22571..23695)
DNA (1125bp) protein (375aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_742_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23692..24762)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
bjp_ig2158_scaffold_742_24
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25213..26427
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J8R2_ANAD2
Tetracycline resistance protein, class C {ECO:0000313|EMBL:GAO03390.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Ana
major facilitator superfamily protein
bjp_ig2158_scaffold_742_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26991..27737)
DNA (747bp) protein (249aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
bjp_ig2158_scaffold_742_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(27793..28914)
DNA (1122bp) protein (374aa)
WD40 domain protein beta Propeller n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF rbh
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40-like beta Propeller containing protein
bjp_ig2158_scaffold_742_27
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28933..29391)
DNA (459bp) protein (153aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:ADU50462.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ADU50462.1};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sed
Peroxiredoxin n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMK2_THEM7
bjp_ig2158_scaffold_742_28

Not on your lists

comp(29399..31003)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL9_GEMAT rbh
Marine sediment metagenome DNA, contig: S01H1_L04486 {ECO:0000313|EMBL:GAF67697.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
peptidase M14 carboxypeptidase A
bjp_ig2158_scaffold_742_29
unknown

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31019..31396
DNA (378bp) protein (126aa)

This feature has no annotations

bjp_ig2158_scaffold_742_30
unknown

Not on your lists

comp(31402..31560)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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