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bjp_ig2158_scaffold_1327

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_1327_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..449
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037D6E18
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AEI47501.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain
bjp_ig2158_scaffold_1327_2
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

567..1025
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003619867
Uncharacterized protein {ECO:0000313|EMBL:KFN49906.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
bjp_ig2158_scaffold_1327_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1203..2999
DNA (1797bp) protein (599aa)
nadE; NH(3)-dependent NAD (+) synthetase (EC:6.3.5.1)
NH(3)-dependent NAD (+) synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM9_GEMAT rbh
NAD+ synthetase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bjp_ig2158_scaffold_1327_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3021..3485
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39741.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_1327_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3482..4300
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Patatin
bjp_ig2158_scaffold_1327_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4440..4862
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFV4_IGNAJ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
bjp_ig2158_scaffold_1327_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4859..5314
DNA (456bp) protein (152aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_1327_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5262..5984)
DNA (723bp) protein (241aa)
putative adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative adenine glycosylase (EC:3.2.2.-)
Endonuclease III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K6_GEMAT
bjp_ig2158_scaffold_1327_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6023..6793
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7879F
putative transporter; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF140
bjp_ig2158_scaffold_1327_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6793..7548
DNA (756bp) protein (252aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT
putative ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter ATP-binding protein
bjp_ig2158_scaffold_1327_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7561..8448
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D8BEA4
Mammalian cell entry related domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
bjp_ig2158_scaffold_1327_12
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8452..8670
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:CEK10954.1}; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
bjp_ig2158_scaffold_1327_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8664..9605
DNA (942bp) protein (314aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribonuclease Z n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RNZ_GEMAT rbh
Ribonuclease Z
bjp_ig2158_scaffold_1327_14
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9602..10249
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGQ2_ANADE
Membrane protein {ECO:0000313|EMBL:KJS16369.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
hypothetical protein
bjp_ig2158_scaffold_1327_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10351..11787)
DNA (1437bp) protein (479aa)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:CDM65828.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CDM65828.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" s
phr; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD6_GEMAT rbh
bjp_ig2158_scaffold_1327_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11942..12547
DNA (606bp) protein (202aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
bjp_ig2158_scaffold_1327_trna_2
unknown

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comp(12579..12651)
DNA (73bp)
transferRNA
bjp_ig2158_scaffold_1327_trna_1
unknown

Not on your lists

comp(12672..12744)
DNA (73bp)
transferRNA
bjp_ig2158_scaffold_1327_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12837..13295
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00037CDE07
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAH37848.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
bjp_ig2158_scaffold_1327_18
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13656..14318
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EI76_AMYSD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF41183.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain
bjp_ig2158_scaffold_1327_19
unknown

Not on your lists

comp(14279..14527)
DNA (249bp) protein (83aa)

This feature has no annotations

bjp_ig2158_scaffold_1327_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14548..16008)
DNA (1461bp) protein (487aa)
id=5224448 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_1327_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16082..17866
DNA (1785bp) protein (595aa)
UPI0003D0625E related cluster n=1 Tax=unknown RepID=UPI0003D0625E
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
bjp_ig2158_scaffold_1327_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18033..19247)
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative macrolide efflux ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative macrolide efflux ABC transporter permease
bjp_ig2158_scaffold_1327_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19244..20533)
DNA (1290bp) protein (430aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative macrolide-specific efflux protein MacA
bjp_ig2158_scaffold_1327_24
unknown

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20737..21096
DNA (360bp) protein (120aa)

This feature has no annotations

bjp_ig2158_scaffold_1327_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21230..22942
DNA (1713bp) protein (571aa)
X-Pro dipeptidyl-peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
X-Pro dipeptidyl-peptidase
X-Pro dipeptidyl-peptidase id=24658770 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber rbh
bjp_ig2158_scaffold_1327_26
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(22998..23435)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
protein of unknown function DUF820
hypothetical protein id=12556714 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
bjp_ig2158_scaffold_1327_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

23717..24217
DNA (501bp) protein (167aa)
methylglyoxal synthase (EC:4.2.3.3); K01734 methylglyoxal synthase [EC:4.2.3.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
methylglyoxal synthase n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003766AFB
methylglyoxal synthase
bjp_ig2158_scaffold_1327_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24257..24808)
DNA (552bp) protein (184aa)
hypothetical protein id=24599981 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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