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bjp_ig2158_scaffold_1953

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_1953_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1..690)
DNA (690bp) protein (230aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW8_GEMAT
tRNA (guanine-N(1)-)-methyltransferase
bjp_ig2158_scaffold_1953_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(690..1220)
DNA (531bp) protein (177aa)
16S rRNA-processing protein RimM n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B774EB
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
16S rRNA-processing protein RimM
bjp_ig2158_scaffold_1953_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1217..1477)
DNA (261bp) protein (87aa)
30S ribosomal protein S16 n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=RS16_HELMI
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
30S ribosomal protein S16
bjp_ig2158_scaffold_1953_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1498..2832)
DNA (1335bp) protein (445aa)
Signal recognition particle protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY3_GEMAT rbh
Signal recognition 54 kDa protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadete
bjp_ig2158_scaffold_1953_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3093..4232
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUY7_9RHIZ rbh
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
bjp_ig2158_scaffold_1953_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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4429..4746
DNA (318bp) protein (106aa)
Uncharacterized protein id=3785442 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein; K07075 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
bjp_ig2158_scaffold_1953_7

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comp(4747..5961)
DNA (1215bp) protein (405aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM61377.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
bjp_ig2158_scaffold_1953_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6156..6803
DNA (648bp) protein (216aa)
Transcriptional regulator n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L578_9CYAN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIK89268.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hyd
Transcriptional regulator, TetR family
bjp_ig2158_scaffold_1953_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6800..7777
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5A8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37418.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_1953_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7774..8523
DNA (750bp) protein (250aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5A9_GEMAT rbh
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH37419.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
bjp_ig2158_scaffold_1953_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8520..9650
DNA (1131bp) protein (377aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5B0_GEMAT rbh
putative ABC transporter permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
bjp_ig2158_scaffold_1953_12
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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9933..11357
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2A44 rbh
membrane protein involved in D-alanine export DltB-like protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
membrane protein involved in D-alanine export DltB-like protein
bjp_ig2158_scaffold_1953_13
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11332..12441
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036A0FFF
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
bjp_ig2158_scaffold_1953_14

Not on your lists

12438..12890
DNA (453bp) protein (151aa)
Marine sediment metagenome DNA, contig: S01H1_S39135 {ECO:0000313|EMBL:GAG43809.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
universal stress protein
UspA domain-containing protein id=3968012 bin=GWF2_Lentisphaerae_57_35 species=Thalassolituus oleivorans genus=Thalassolituus taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Displaying 14 items

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