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BJP_Ig2158_Hor_250_2014_Clostridiales_40_5

BJP_IG2158_Clostridiales_40_5
In projects: 09V250M02_2014  |  horonobe_genomes

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: BJP_IG2158_UNK

Properties

Avg. coverage: 5.31 Longest contig: 18.95 Kbp Bin length: 1.58 Mbp GC content: 40.23 %
Contigs count: 441 Features count: 1821 rRNAs count: 0 tRNAs count: 28

Genome completeness

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 12 / 38 MC: 2
Displaying items 1-50 of 441 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2158_scaffold_1117
Class: Clostridia (54.55%)
22 18952 bp 40.23 5.72 87.95
bjp_ig2158_scaffold_3246 15 8897 bp 41.40 5.16 72.42
bjp_ig2158_scaffold_2070
Order: Clostridiales (66.67%)
15 12476 bp 38.38 5.11 85.82
bjp_ig2158_scaffold_2319
Class: Clostridia (76.92%)
13 11527 bp 39.16 5.39 79.38
bjp_ig2158_scaffold_3105
Domain: Bacteria (92.31%)
13 9189 bp 36.50 5.09 91.45
bjp_ig2158_scaffold_2284
Order: Clostridiales (58.33%)
12 11641 bp 37.93 5.90 91.18
bjp_ig2158_scaffold_3090
Order: Clostridiales (58.33%)
12 9227 bp 44.17 4.44 92.08
bjp_ig2158_scaffold_4257
Order: Clostridiales (75%)
12 7140 bp 39.97 5.59 86.81
bjp_ig2158_scaffold_3926
Order: Clostridiales (50%)
12 7697 bp 38.98 5.85 82.79
bjp_ig2158_scaffold_3023
Order: Clostridiales (63.64%)
11 9404 bp 40.89 5.63 89.45
bjp_ig2158_scaffold_4717
Order: Clostridiales (63.64%)
11 6592 bp 38.17 5.57 70.31
bjp_ig2158_scaffold_2352
Order: Clostridiales (54.55%)
11 11417 bp 44.02 5.53 88.08
bjp_ig2158_scaffold_3317
Order: Clostridiales (54.55%)
11 8759 bp 44.89 5.00 89.15
bjp_ig2158_scaffold_2902
Species: Dethiobacter alkaliphilus (63.64%)
11 9668 bp 40.55 6.38 88.80
bjp_ig2158_scaffold_4252
Phylum: Firmicutes (63.64%)
11 7145 bp 38.57 5.04 83.47
bjp_ig2158_scaffold_3621
Class: Clostridia (63.64%)
11 8172 bp 38.56 5.36 79.70
bjp_ig2158_scaffold_3115
Class: Clostridia (63.64%)
11 9168 bp 37.59 5.20 79.12
bjp_ig2158_scaffold_4613
Class: Clostridia (72.73%)
11 6701 bp 44.55 5.19 98.22
bjp_ig2158_scaffold_2587
Class: Clostridia (60%)
10 10632 bp 37.81 4.63 76.78
bjp_ig2158_scaffold_3544
Order: Clostridiales (70%)
10 8323 bp 42.83 5.10 88.85
bjp_ig2158_scaffold_3545
Class: Clostridia (60%)
10 8321 bp 41.87 5.34 94.96
bjp_ig2158_scaffold_4450
Order: Clostridiales (50%)
10 6888 bp 41.20 5.23 87.41
bjp_ig2158_scaffold_3334
Species: Dethiobacter alkaliphilus (70%)
10 8724 bp 40.90 4.90 95.22
bjp_ig2158_scaffold_3355
Domain: Bacteria (60%)
10 8684 bp 36.96 5.35 65.40
bjp_ig2158_scaffold_3108
Order: Clostridiales (90%)
10 9185 bp 39.66 5.10 82.44
bjp_ig2158_scaffold_4788
Order: Clostridiales (60%)
10 6486 bp 38.08 5.43 81.41
bjp_ig2158_scaffold_6322
Species: Dethiobacter alkaliphilus (80%)
10 6884 bp 43.88 5.38 95.61
bjp_ig2158_scaffold_2698
Species: Dethiobacter alkaliphilus (50%)
10 10316 bp 37.56 5.82 95.01
bjp_ig2158_scaffold_3939
Class: Clostridia (60%)
10 7672 bp 36.86 6.00 83.84
bjp_ig2158_scaffold_5358
Domain: Bacteria (60%)
10 5886 bp 36.10 5.48 78.47
bjp_ig2158_scaffold_3702
Class: Clostridia (60%)
10 8049 bp 37.07 5.91 86.47
bjp_ig2158_scaffold_2272
Species: Dethiobacter alkaliphilus (60%)
10 11682 bp 42.62 5.17 91.99
bjp_ig2158_scaffold_10837 10 3187 bp 38.63 6.87 84.06
bjp_ig2158_scaffold_8864
Order: Clostridiales (50%)
10 3805 bp 42.02 6.03 91.77
bjp_ig2158_scaffold_3493
Order: Clostridiales (55.56%)
9 8412 bp 44.50 5.55 87.45
bjp_ig2158_scaffold_4424
Order: Clostridiales (66.67%)
9 6921 bp 39.11 4.55 76.59
bjp_ig2158_scaffold_2615
Order: Clostridiales (88.89%)
9 10545 bp 39.96 4.82 88.88
bjp_ig2158_scaffold_4248
Order: Clostridiales (55.56%)
9 7149 bp 39.82 5.67 87.20
bjp_ig2158_scaffold_5329
Domain: Bacteria (77.78%)
9 5909 bp 40.75 4.95 74.12
bjp_ig2158_scaffold_3698
Domain: Bacteria (66.67%)
9 8060 bp 38.62 5.29 79.28
bjp_ig2158_scaffold_4652
Species: Dethiobacter alkaliphilus (50%)
8 6662 bp 40.33 5.72 87.45
bjp_ig2158_scaffold_4919
Order: Clostridiales (50%)
8 6338 bp 36.24 5.23 89.22
bjp_ig2158_scaffold_3255
Order: Thermoanaerobacterales (50%)
8 8886 bp 42.45 4.63 92.17
bjp_ig2158_scaffold_4417
Order: Clostridiales (50%)
8 6925 bp 39.73 4.79 94.70
bjp_ig2158_scaffold_2819
Species: Dethiobacter alkaliphilus (75%)
8 9922 bp 41.25 6.18 93.07
bjp_ig2158_scaffold_6968
Order: Clostridiales (62.5%)
8 4685 bp 39.53 6.47 86.96
bjp_ig2158_scaffold_5711
Order: Clostridiales (50%)
8 5543 bp 37.02 5.63 87.25
bjp_ig2158_scaffold_5458
Domain: Bacteria (75%)
8 5774 bp 40.98 4.94 85.57
bjp_ig2158_scaffold_3667
Order: Clostridiales (50%)
8 8114 bp 44.66 4.66 82.93
bjp_ig2158_scaffold_4573
Order: Thermoanaerobacterales (50%)
8 6743 bp 41.52 5.67 82.66
Displaying items 1-50 of 441 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.