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bjp_ig2158_scaffold_3193

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3193_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..342)
DNA (342bp) protein (114aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGD9_9SPHN
bjp_ig2158_scaffold_3193_2
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(488..1408)
DNA (921bp) protein (307aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
fmt; Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=FMT_SPHAL rbh
bjp_ig2158_scaffold_3193_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1556..2182
DNA (627bp) protein (209aa)
Recombination protein RecR n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RECR_SPHAL rbh
recR; recombination protein RecR
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
bjp_ig2158_scaffold_3193_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2214..2747
DNA (534bp) protein (178aa)
Peptide deformylase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWJ8_SPHAL rbh
peptide deformylase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
bjp_ig2158_scaffold_3193_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2862..3404)
DNA (543bp) protein (181aa)
Protein GrpE n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWW3_9SPHN
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria;
GrpE protein HSP-70 cofactor
bjp_ig2158_scaffold_3193_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3409..4452)
DNA (1044bp) protein (348aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGD6_9SPHN rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;
hrcA; heat-inducible transcription repressor
bjp_ig2158_scaffold_3193_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4561..5277
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGD2_9SPHN rbh
rph; ribonuclease PH
bjp_ig2158_scaffold_3193_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5382..6113
DNA (732bp) protein (244aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWJ2_SPHAL rbh
putative deoxyribonucleotide triphosphate pyrophosphatase
bjp_ig2158_scaffold_3193_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6277..7422
DNA (1146bp) protein (382aa)
Coproporphyrinogen III oxidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH08_9SPHN rbh
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:ENY82716.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
coproporphyrinogen III oxidase
bjp_ig2158_scaffold_3193_10
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7533..8423
DNA (891bp) protein (297aa)
Tyrosine recombinase XerC n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWJ0_SPHAL rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
xerC1; Tyrosine recombinase XerC
bjp_ig2158_scaffold_3193_11
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8543..8989)
DNA (447bp) protein (149aa)
Alkaline phosphatase-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWI9_SPHAL
alkaline phosphatase-like protein
Alkaline phosphatase-like protein {ECO:0000313|EMBL:ABF51983.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
Displaying 11 items

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