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bjp_ig2158_scaffold_877

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_877_trna_1
unknown

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379..451
DNA (73bp)
transferRNA
bjp_ig2158_scaffold_877_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(622..837)
DNA (216bp) protein (72aa)
cold-shock protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A51ABE
Cold shock protein CspA {ECO:0000313|EMBL:KHS45154.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
cold shock protein
bjp_ig2158_scaffold_877_2
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(847..1185)
DNA (339bp) protein (113aa)
Transcriptional regulator TraR/DksA family protein n=1 Tax=Sphingobium chungbukense RepID=G3KBA8_9SPHN
dnaK suppressor protein
Tax=BJP_IG2102_Porphyrobacter_62_18
bjp_ig2158_scaffold_877_3
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1187..2038)
DNA (852bp) protein (284aa)
Universal stress protein UspA n=1 Tax=Sphingobium chungbukense RepID=G3KBA9_9SPHN rbh
universal stress protein UspA
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
bjp_ig2158_scaffold_877_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2052..3536)
DNA (1485bp) protein (495aa)
Sulfate permease n=1 Tax=alpha proteobacterium JLT2015 RepID=M2T544_9PROT rbh
sulfate transporter
Tax=BJP_IG2102_Porphyrobacter_62_18
bjp_ig2158_scaffold_877_5
GWB1_OP11_43_14, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3804..4277
DNA (474bp) protein (158aa)
Putative carboxyl transferase n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6N4Q3_GORPV
RNA pyrophosphohydrolase {ECO:0000313|EMBL:KKS96985.1}; TaxID=1618578 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_43_14.;"
putative carboxyl transferase
bjp_ig2158_scaffold_877_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4772..6094
DNA (1323bp) protein (441aa)
Chromate transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Y2_NOVAD rbh
chromate transporter rbh
Chromate transporter {ECO:0000313|EMBL:ABD26041.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
bjp_ig2158_scaffold_877_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6243..7793)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZ41_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD47783.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
bjp_ig2158_scaffold_877_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..8517)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A6S0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50438.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
bjp_ig2158_scaffold_877_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8522..9427)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50437.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
secreted alkaline phosphatase (fragment)
bjp_ig2158_scaffold_877_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9462..9806
DNA (345bp) protein (115aa)
Transposase IS3/IS911 family protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJA1_9SPHN
transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:EHJ58620.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
bjp_ig2158_scaffold_877_11
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9803..10144
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003686FA9
IS66 Orf2 family protein {ECO:0000313|EMBL:EZP83427.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
transposase
bjp_ig2158_scaffold_877_12
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10199..11848
DNA (1650bp) protein (550aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIK5_9SPHN rbh
Mobile element protein {ECO:0000313|EMBL:CCW17065.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
hypothetical protein rbh
bjp_ig2158_scaffold_877_13
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11848..12060
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y7Q7_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR00897.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
bjp_ig2158_scaffold_877_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12055..13209)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP80_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD50437.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
secreted alkaline phosphatase (fragment)
bjp_ig2158_scaffold_877_15
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13236..15731)
DNA (2496bp) protein (832aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQY6_9SPHN rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAD47784.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
TonB-dependent receptor
bjp_ig2158_scaffold_877_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16113..16928)
DNA (816bp) protein (272aa)
glutamine amidotransferase (EC:6.3.5.2)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXV8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD47343.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
bjp_ig2158_scaffold_877_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16925..17851)
DNA (927bp) protein (309aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
cysK; cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Sphingomonas sp. S17 RepID=F3WVS2_9SPHN
bjp_ig2158_scaffold_877_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17848..18528)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y337_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47341.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
bjp_ig2158_scaffold_877_19
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19099..19797
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003097C8D
Esterase {ECO:0000313|EMBL:KHL26737.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
bjp_ig2158_scaffold_877_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19870..20673)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZPR5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD47339.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
bjp_ig2158_scaffold_877_21
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20811..22433
DNA (1623bp) protein (541aa)
Putative transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHP2_9SPHN rbh
Putative transporter {ECO:0000313|EMBL:GAD47442.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
hypothetical protein
Displaying 22 items

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