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bjp_ig2158_scaffold_1622

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_1622_1
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(73..555)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVZ3_SPHAL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
bjp_ig2158_scaffold_1622_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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604..936
DNA (333bp) protein (111aa)
Putative ArsR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXX3_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10489.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
bjp_ig2158_scaffold_1622_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1015..1767)
DNA (753bp) protein (251aa)
Alpha/beta hydrolase fold n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVZ6_SPHAL rbh
alpha/beta hydrolase
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABF52176.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
bjp_ig2158_scaffold_1622_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1817..2467)
DNA (651bp) protein (217aa)
DSBA oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF62_9SPHN rbh
DSBA oxidoreductase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
bjp_ig2158_scaffold_1622_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2594..3034
DNA (441bp) protein (147aa)
Putative MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVR0_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:KGB55548.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
hypothetical protein
bjp_ig2158_scaffold_1622_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3031..4179
DNA (1149bp) protein (383aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRD1_SPHAL rbh
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AJA10495.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fr
bjp_ig2158_scaffold_1622_7
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4183..5769
DNA (1587bp) protein (529aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRD0_SPHAL rbh
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
EmrB/QacA family drug resistance transporter
bjp_ig2158_scaffold_1622_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5997..6419
DNA (423bp) protein (141aa)
Putative transposase for insertion sequence element n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPU6_9SPHN
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAK65774.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
bjp_ig2158_scaffold_1622_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6466..6939
DNA (474bp) protein (158aa)
Putative transposase for insertion sequence element n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITS9_9SPHN rbh
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAK66789.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
bjp_ig2158_scaffold_1622_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6952..7590)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPK0_SPHAL rbh
hypothetical protein; K08984 putative membrane protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
bjp_ig2158_scaffold_1622_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7775..8800)
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; Aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV88_9SPHN rbh
bjp_ig2158_scaffold_1622_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8908..9285)
DNA (378bp) protein (126aa)
50S ribosomal protein L19 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG14_9SPHN
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
rplS; 50S ribosomal protein L19
bjp_ig2158_scaffold_1622_13
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9292..10029)
DNA (738bp) protein (246aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=TRMD_SPHAL rbh
trmD; tRNA (guanine-N(1)-)-methyltransferase
bjp_ig2158_scaffold_1622_14
unknown

Not on your lists

comp(10026..10391)
DNA (366bp) protein (122aa)

This feature has no annotations

bjp_ig2158_scaffold_1622_15
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10379..10756)
DNA (378bp) protein (126aa)
Putative hydrolase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C176_9SPHN
Putative hydrolase {ECO:0000313|EMBL:EIZ77522.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
putative hydrolase
bjp_ig2158_scaffold_1622_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10753..11037)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0B5_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH47904.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
bjp_ig2158_scaffold_1622_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11152..12798)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00035D9272 rbh
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amidohydrolase
bjp_ig2158_scaffold_1622_18
unknown

Not on your lists

comp(12836..13162)
DNA (327bp) protein (109aa)

This feature has no annotations

bjp_ig2158_scaffold_1622_19
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13201..14898)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000376F4EC
L-proline dehydrogenase/delta1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:GAO38909.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
delta-1-pyrroline-5-carboxylate dehydrogenase
Displaying 19 items

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