ggKbase home page

bjp_ig2157_scaffold_479

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_479_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174..668)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F976A7
L-2-amino-thiazoline-4-carboxylic acid hydrolase
L-2-amino-thiazoline-4-carboxylic acid hydrolase {ECO:0000313|EMBL:EMG51635.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="
bjp_ig2157_scaffold_479_2
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..2030)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000378F750
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KIC33162.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="
TRAP-type C4-dicarboxylate transport system, large permease component
bjp_ig2157_scaffold_479_3
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2042..2620)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037BB698
TRAP transporter, DctQ family protein {ECO:0000313|EMBL:EAP75508.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseo
TRAP transporter DctQ family protein
bjp_ig2157_scaffold_479_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2684..3763)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036E25CC
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TRAP transporter substrate-binding protein
bjp_ig2157_scaffold_479_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3868..4563)
DNA (696bp) protein (232aa)
AtrA transcriptional regulator id=2429423 bin=GWF1_Rhodobacteraceae_65_7 species=Bradyrhizobium oligotrophicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
AtrA transcriptional regulator Tax=GWF1_Rhodobacteraceae_65_7_curated
AtrA transcriptional regulator
bjp_ig2157_scaffold_479_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4560..4961)
DNA (402bp) protein (134aa)
Endoribonuclease L-PSP id=2429429 bin=GWF1_Rhodobacteraceae_65_7 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
endoribonuclease L-PSP Tax=GWF1_Rhodobacteraceae_65_7_curated
endoribonuclease L-PSP
bjp_ig2157_scaffold_479_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4954..5853)
DNA (900bp) protein (300aa)
id=2429416 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
id=2429416 Tax=GWF1_Rhodobacteraceae_65_7_curated
bjp_ig2157_scaffold_479_8
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5850..7097)
DNA (1248bp) protein (416aa)
AcoC_1 protein {ECO:0000313|EMBL:KIT17453.1}; EC=2.3.1.12 {ECO:0000313|EMBL:KIT17453.1};; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannas
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037C4C6B
dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system
bjp_ig2157_scaffold_479_9
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7108..8082)
DNA (975bp) protein (325aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWF1_Rhodobacteraceae_65_7_curated
Transketolase central region id=2429425 bin=GWF1_Rhodobacteraceae_65_7 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
transketolase
bjp_ig2157_scaffold_479_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8084..9073)
DNA (990bp) protein (330aa)
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:CDX13295.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CDX13295.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
TPP-dependent acetoin dehydrogenase alpha-subunit id=2429424 bin=GWF1_Rhodobacteraceae_65_7 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
dehydrogenase E1 component
bjp_ig2157_scaffold_479_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9150..10892)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003620994 rbh
Putative Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:CDX32513.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhiz
hypothetical protein
bjp_ig2157_scaffold_479_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11006..11764
DNA (759bp) protein (253aa)
Putative Pyrroline-5-carboxylate reductase {ECO:0000313|EMBL:CDX32488.1}; EC=1.5.1.2 {ECO:0000313|EMBL:CDX32488.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph
Pyrroline-5-carboxylate reductase id=2864441 bin=GWF1_Rhodobacteraceae_65_7 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
proC1; pyrroline-5-carboxylate reductase
bjp_ig2157_scaffold_479_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11759..12520)
DNA (762bp) protein (254aa)
Putative short-chain type dehydrogenase/reductase y4eK {ECO:0000313|EMBL:CDX56481.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDX56481.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Putative short-chain type id=2429417 bin=GWF1_Rhodobacteraceae_65_7 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
short-chain type dehydrogenase/reductase y4eK
bjp_ig2157_scaffold_479_14
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12593..14035)
DNA (1443bp) protein (481aa)
Cysteine desulfurase {ECO:0000313|EMBL:EPX76646.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EPX76646.1};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Cysteine desulfurase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9Q5M2_9RHOB rbh
aminotransferase, class V superfamily protein
bjp_ig2157_scaffold_479_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14074..14628
DNA (555bp) protein (185aa)
AsnC family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PBR0_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EKF44581.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
transcriptional regulator, AsnC family
bjp_ig2157_scaffold_479_16
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14630..15466)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KY28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EED34371.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1
bjp_ig2157_scaffold_479_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15477..16793)
DNA (1317bp) protein (439aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Oceanibaculum indicum P24 RepID=K2JE76_9PROT rbh
TRAP-type C4-dicarboxylate transport system, large permease component
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:CDM25879.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
bjp_ig2157_scaffold_479_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16804..17355)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037BB698
TRAP transporter DctQ family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TRAP transporter DctQ family protein
bjp_ig2157_scaffold_479_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17417..18511)
DNA (1095bp) protein (365aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WST0_RHOS5
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TRAP dicarboxylate transporter subunit DctP
bjp_ig2157_scaffold_479_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18576..19580)
DNA (1005bp) protein (335aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNM4_RHOPX rbh
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADU44752.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;
bjp_ig2157_scaffold_479_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19577..21112)
DNA (1536bp) protein (512aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J0Z7_RHOP2 rbh
AMP-dependent synthetase and ligase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
AMP-dependent synthetase and ligase
bjp_ig2157_scaffold_479_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21112..21546)
DNA (435bp) protein (145aa)
Thioesterase superfamily protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNM3_RHOPX
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADU44751.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
bjp_ig2157_scaffold_479_23
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21543..22160)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI0003464707
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
bjp_ig2157_scaffold_479_24
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22352..23350
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KEQ11478.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas mo
TetR-family transcriptional regulator id=2534861 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
bjp_ig2157_scaffold_479_25
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23357..24043)
DNA (687bp) protein (229aa)
Anti-sigma factor, ChrR n=1 Tax=Ahrensia sp. R2A130 RepID=E0MJE0_9RHOB
Anti-sigma factor, ChrR {ECO:0000313|EMBL:EFL89954.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;
hypothetical protein
bjp_ig2157_scaffold_479_26
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24274..24831
DNA (558bp) protein (186aa)
IS91-family transposase n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RB03_9RHOB
Mobile element protein
Mobile element protein {ECO:0000313|EMBL:AHM04461.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium
Displaying 26 items

View Taxonomy