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bjp_ig2157_scaffold_2302

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_2302_1
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54..605)
DNA (552bp) protein (184aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWJ0_9RHOB
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EEW26933.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" so
nirH; nitrite reductase heme biosynthesis subunit H
bjp_ig2157_scaffold_2302_2
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602..1075)
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B4Y5_PARDP
AsnC family transcriptional regulator
Tax=BJP_08E140C01_Roseovarius_63_250
bjp_ig2157_scaffold_2302_3
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1072..2064)
DNA (993bp) protein (331aa)
Nitrite reductase heme biosynthesis D/L protein, putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4R3_POLGS
nitrite reductase heme biosynthesis subunit D/L
Tax=BJP_IG2158_Rhodobacterales_69_12
bjp_ig2157_scaffold_2302_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2169..2588)
DNA (420bp) protein (140aa)
Cytochrome cd1 nitrite reductase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4R4_POLGS
nirF; cytochrome cd1 nitrite reductase
Cytochrome cd1 nitrite reductase {ECO:0000313|EMBL:ADZ69006.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC
bjp_ig2157_scaffold_2302_5
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2579..3061)
DNA (483bp) protein (161aa)
Cytochrome cd1 nitrite reductase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CP58_9RHOB
Protein nirF {ECO:0000313|EMBL:KIC38561.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
nirF; cytochrome cd1 nitrite reductase
bjp_ig2157_scaffold_2302_6
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3165..4121)
DNA (957bp) protein (319aa)
uroporphyrin-III C-methyltransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5B743
Uroporphyrin-III methylase, involved in siroheme cofactor synthe sis for assimilatory nitrite reductase
Tax=BJP_08E140C01_Roseovarius_63_250
bjp_ig2157_scaffold_2302_7
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4202..4624)
DNA (423bp) protein (141aa)
Copper binding protein, plastocyanin/azurin family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R292_9RHOB
Copper binding protein, plastocyanin/azurin family {ECO:0000313|EMBL:EEA95384.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;
blue (type 1) copper domain-containing protein
bjp_ig2157_scaffold_2302_8
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..6055)
DNA (1383bp) protein (461aa)
Denitrification system component NirT/cytochrome c552 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CP54_9RHOB
nirT; Denitrification system component NirT
Tax=BJP_08E140C01_Roseovarius_63_250
bjp_ig2157_scaffold_2302_9
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6058..6321)
DNA (264bp) protein (88aa)
Denitrification system component NirT/cytochrome c552 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CP54_9RHOB
napC; cytochrome c-type protein
Tax=BJP_IG2158_Rhodobacterales_69_12
bjp_ig2157_scaffold_2302_10
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6447..8024)
DNA (1578bp) protein (526aa)
Nitrite reductase {ECO:0000313|EMBL:EEX11525.1}; EC=1.7.2.1 {ECO:0000313|EMBL:EEX11525.1};; EC=1.7.99.1 {ECO:0000313|EMBL:EEX11525.1};; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacte
nirS; nitrite reductase (EC:1.7.2.1)
Nitrite reductase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CP53_9RHOB
bjp_ig2157_scaffold_2302_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8238..8690
DNA (453bp) protein (151aa)
Nitric oxide reductase, small subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4S0_POLGS
norC; nitric oxide reductase, small subunit
Nitric oxide reductase, small subunit {ECO:0000313|EMBL:ADZ69012.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 /
bjp_ig2157_scaffold_2302_12
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8701..10092
DNA (1392bp) protein (464aa)
Nitric oxide reductase, large subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4S1_POLGS
norB; nitric oxide reductase, large subunit
Tax=BJP_IG2158_Rhodobacterales_69_12
bjp_ig2157_scaffold_2302_13
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10098..10907
DNA (810bp) protein (270aa)
CbbQ/NirQ/NorQ/GpvN family protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CP48_9RHOB
norQ; nitric oxide reductase Q protein
CbbQ/NirQ/NorQ/GpvN family protein {ECO:0000313|EMBL:EEX11520.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibact
bjp_ig2157_scaffold_2302_14
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10904..12880
DNA (1977bp) protein (659aa)
von Willebrand factor type A n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWH8_9RHOB
norD; nitric oxide reductase D protein
Tax=BJP_IG2158_Rhodobacterales_64_37
bjp_ig2157_scaffold_2302_15
unknown

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12877..13047
DNA (171bp) protein (57aa)

This feature has no annotations

bjp_ig2157_scaffold_2302_16
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13044..13592
DNA (549bp) protein (183aa)
NorE protein involved in nitric oxide reduction (Cytochrome c oxidase subunit III-like protein) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4S4_POLGS
norE; nitric oxide reduction protein NorE
Tax=BJP_IG2158_Rhodobacterales_69_12
bjp_ig2157_scaffold_2302_17
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13596..13862
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4S5_POLGS
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
bjp_ig2157_scaffold_2302_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13847..14323)
DNA (477bp) protein (159aa)
Putative uncharacterized protein id=2470632 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
glutamyl-tRNA synthetase Tax=GWF1_Rhodobacteraceae_65_7_curated
glutamyl-tRNA synthetase
bjp_ig2157_scaffold_2302_19
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14320..15024)
DNA (705bp) protein (235aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWH5_9RHOB
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EEW26918.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="
CarD family transcriptional regulator
bjp_ig2157_scaffold_2302_20
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15076..16392)
DNA (1317bp) protein (439aa)
UPI0003D1AD5A related cluster n=1 Tax=unknown RepID=UPI0003D1AD5A rbh
Contig31, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49798.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
dctM9; TRAP dicarboxylate transporter, subunit DctM
bjp_ig2157_scaffold_2302_21
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16389..16847)
DNA (459bp) protein (153aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V9K2_9RHOB
dctQ6; TRAP transporter, subunit DctQ
Tax=BJP_IG2158_Rhodobacterales_69_12
Displaying 21 items

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