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bjp_ig2157_scaffold_1244

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1244_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..108)
DNA (108bp) protein (36aa)
Orn/DAP/Arg decarboxylase 2 {ECO:0000313|EMBL:ABN75814.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp
bjp_ig2157_scaffold_1244_2
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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232..681
DNA (450bp) protein (150aa)
Transcriptional regulator, AsnC family n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WX58_RHOS5
AsnC family transcriptional regulator
Tax=BJP_IG2158_Rhodobacterales_64_37
bjp_ig2157_scaffold_1244_3
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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802..1365
DNA (564bp) protein (188aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9Q9E8_9RHOB
Suspect SCG annotation. See neighboring gene [bjp_ig2157_scaffold_1244_4].
Tax=BJP_08E140C01_Roseovarius_63_250
bjp_ig2157_scaffold_1244_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1343..3469
DNA (2127bp) protein (709aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02
Valine--tRNA ligase n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F5M0J9_RHOSH rbh
bjp_ig2157_scaffold_1244_5
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3473..4114)
DNA (642bp) protein (214aa)
OmpA family protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FN97_PELBH
OmpA family protein {ECO:0000313|EMBL:EAU45683.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis
putative OmpA-like protein
bjp_ig2157_scaffold_1244_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4120..5481)
DNA (1362bp) protein (454aa)
Type II and III secretion system protein id=2469879 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Outer membrane general secretion pathway protein, secretin; K02280 pilus assembly protein CpaC Tax=GWF1_Rhodobacteraceae_65_7_curated
type II and III secretion system protein
bjp_ig2157_scaffold_1244_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5668..6525)
DNA (858bp) protein (286aa)
CpaB family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E151_9RHOB
Pilus assembly protein CpaB {ECO:0000313|EMBL:KGB81171.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp.
Flp pilus assembly protein CpaB-like protein
bjp_ig2157_scaffold_1244_8
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6760..7434)
DNA (675bp) protein (225aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=PTH_RUEPO
bjp_ig2157_scaffold_1244_9
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7526..8206
DNA (681bp) protein (227aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:EDM69831.1}; EC=3.1.1.29 {ECO:0000313|EMBL:EDM69831.1};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
Peptidyl-tRNA hydrolase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FVC9_9RHOB
methyltransferase
bjp_ig2157_scaffold_1244_10
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8261..8887)
DNA (627bp) protein (209aa)
50S ribosomal protein L25 n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=RL25_RHOS5
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
bjp_ig2157_scaffold_1244_11
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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9089..10069
DNA (981bp) protein (327aa)
Putative sulfotransferase protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BPR2_9GAMM
Tax=BJP_IG2158_Methylococcales_50_91
bjp_ig2157_scaffold_1244_12
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10083..11246)
DNA (1164bp) protein (388aa)
Lactate dehydrogenase {ECO:0000313|EMBL:KGL01212.1}; EC=1.1.2.3 {ECO:0000313|EMBL:KGL01212.1};; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
L-lactate dehydrogenase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B39867
L-lactate dehydrogenase
bjp_ig2157_scaffold_1244_13
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11325..12194)
DNA (870bp) protein (290aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ETW12384.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ETW12384.1};; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase IlvE n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZFE4_ROSLO rbh
bjp_ig2157_scaffold_1244_14
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12374..12892
DNA (519bp) protein (173aa)
Transcriptional regulator n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LMV8_DINSH
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABV95033.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobac
bjp_ig2157_scaffold_1244_15
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12889..13023
DNA (135bp) protein (45aa)
Protein PetR n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZFE7_ROSLO
petR; protein PetR
Protein PetR {ECO:0000313|EMBL:AII85999.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA
Displaying 15 items

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