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BJP_Ig2157_Hor_140_2014_Thermoplasmata_53_6

07V140M03_2014_Euryarchaeota_52_6
In projects: 07V140M03_2014  |  diaphorachaeota  |  archaea_ggkbase  |  horonobe_genomes

Consensus taxonomy: Euryarchaeota  →  Archaea

Metagenomic Context

Parent: BJP_IG2157_UNK

Properties

Avg. coverage: 6.27 Longest contig: 13.27 Kbp Bin length: 776.56 Kbp GC content: 52.38 %
Contigs count: 246 Features count: 885 rRNAs count: 0 tRNAs count: 11

Genome completeness

partial RP 25 / 55 BSCG 9 / 51 ASCG 28 / 38 MC: 3

Description

Fragmented. May not be clean -->curated, please check (YA) Thermoplasmata archaeon HGW-Thermoplasmata-2 (possibly novel; 61.1% of identity based on NCBI blast search) old name; BJP_IG2157_Euryarchaeota_53_6

Displaying items 101-150 of 246 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2157_scaffold_22463
Species: marine sediment metagenome (100%)
1 1252 bp 53.67 4.43 89.14
bjp_ig2157_scaffold_2057
Species: BJP_IG2158_Thermoplasmatales_53_16 (62.5%)
8 6831 bp 52.66 7.20 89.20
bjp_ig2157_scaffold_1838
Domain: Archaea (66.67%)
9 7427 bp 51.53 6.83 89.31
bjp_ig2157_scaffold_8376
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 2660 bp 48.61 4.96 89.32
bjp_ig2157_scaffold_5210 4 3696 bp 53.00 5.97 89.37
bjp_ig2157_scaffold_8367
Phylum: Euryarchaeota (80%)
5 2662 bp 53.38 5.69 89.48
bjp_ig2157_scaffold_15588
Species: Halococcus salifodinae (50%)
2 1675 bp 54.27 6.99 89.55
bjp_ig2157_scaffold_2315
Phylum: Euryarchaeota (50%)
6 6354 bp 49.75 6.70 89.61
bjp_ig2157_scaffold_21070
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1319 bp 55.04 7.51 89.61
bjp_ig2157_scaffold_17372
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1537 bp 56.02 6.34 89.79
bjp_ig2157_scaffold_18552
Species: archaeon GW2011_AR19 (50%)
2 1459 bp 54.15 5.65 89.86
bjp_ig2157_scaffold_8598
Phylum: Euryarchaeota (60%)
5 2608 bp 53.14 5.00 89.95
bjp_ig2157_scaffold_27306
Species: groundwater metagenome (50%)
2 1063 bp 54.56 7.90 90.03
bjp_ig2157_scaffold_6320
Phylum: Euryarchaeota (80%)
5 3242 bp 51.48 6.48 90.13
bjp_ig2157_scaffold_18156
Species: RBG_13_Euryarchaeota_61_15_curated (50%)
2 1484 bp 51.42 4.75 90.16
bjp_ig2157_scaffold_1592
Phylum: Euryarchaeota (50%)
10 8188 bp 53.00 7.58 90.21
bjp_ig2157_scaffold_3947 8 4426 bp 50.50 4.20 90.28
bjp_ig2157_scaffold_2905
Phylum: Euryarchaeota (57%)
7 5448 bp 55.03 7.60 90.47
bjp_ig2157_scaffold_8646
Phylum: Euryarchaeota (50%)
4 2595 bp 52.29 6.71 90.52
bjp_ig2157_scaffold_2380
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
4 6201 bp 51.23 6.92 90.57
bjp_ig2157_scaffold_12730
Species: Candidatus Methanoperedens nitroreducens (100%)
1 1953 bp 52.43 6.07 90.63
bjp_ig2157_scaffold_15135
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1714 bp 54.26 5.60 90.67
bjp_ig2157_scaffold_20508
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1349 bp 51.74 5.00 90.73
bjp_ig2157_scaffold_26254
Species: RBG_16_Chloroflexi_48_7_curated (50%)
2 1099 bp 53.69 4.78 90.90
bjp_ig2157_scaffold_1729
Species: BJP_IG2158_Thermoplasmatales_53_16 (66.67%)
9 7771 bp 53.48 7.24 90.99
bjp_ig2157_scaffold_2040
Domain: Bacteria (75%)
8 6889 bp 53.94 6.86 91.01
bjp_ig2157_scaffold_3395
Phylum: Euryarchaeota (75%)
4 4920 bp 52.66 5.52 91.40
bjp_ig2157_scaffold_4216
Phylum: Euryarchaeota (62.5%)
8 4255 bp 52.95 6.17 91.45
bjp_ig2157_scaffold_19497
Species: Methanolacinia petrolearia (50%)
2 1403 bp 48.68 4.70 91.52
bjp_ig2157_scaffold_14372
Phylum: Euryarchaeota (100%)
3 1783 bp 55.47 6.31 91.53
bjp_ig2157_scaffold_2350 7 6268 bp 52.54 5.84 91.61
bjp_ig2157_scaffold_7812
Class: Thermoplasmata (66.67%)
3 2801 bp 52.66 6.69 91.68
bjp_ig2157_scaffold_7158
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 2977 bp 49.75 5.54 91.70
bjp_ig2157_scaffold_9540
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
4 2416 bp 52.90 5.15 91.76
bjp_ig2157_scaffold_3837
Phylum: Euryarchaeota (66.67%)
6 4516 bp 51.68 6.58 91.87
bjp_ig2157_scaffold_15988
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (100%)
1 1640 bp 54.02 6.13 92.01
bjp_ig2157_scaffold_7216
Phylum: Euryarchaeota (71.43%)
7 2963 bp 49.00 5.32 92.14
bjp_ig2157_scaffold_6804
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
3 3089 bp 53.38 7.14 92.17
bjp_ig2157_scaffold_2369
Phylum: Euryarchaeota (66.67%)
6 6226 bp 53.65 8.24 92.42
bjp_ig2157_scaffold_11043
Phylum: Euryarchaeota (66.67%)
3 2169 bp 53.71 5.19 92.53
bjp_ig2157_scaffold_18756
Species: Thermoplasmatales archaeon SCGC AB-539-C06 (100%)
1 1446 bp 54.43 3.94 92.53
bjp_ig2157_scaffold_13633
Species: RBG_16_Euryarchaeota_62_10_curated (50%)
2 1853 bp 53.91 7.12 92.61
bjp_ig2157_scaffold_1356
Order: Thermoplasmatales (50%)
8 9346 bp 54.69 7.41 92.64
bjp_ig2157_scaffold_25769
Species: groundwater metagenome (50%)
2 1116 bp 48.75 2.96 92.74
bjp_ig2157_scaffold_5184
Species: Methanofollis liminatans (50%)
4 3705 bp 54.17 6.07 92.79
bjp_ig2157_scaffold_1753
Species: BJP_IG2158_Thermoplasmatales_53_16 (66.67%)
6 7712 bp 52.46 7.12 92.86
bjp_ig2157_scaffold_23213
Species: BJP_08E140C01_Anaerolineales_40_8 (100%)
1 1218 bp 49.01 4.68 92.86
bjp_ig2157_scaffold_15519
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1680 bp 53.33 5.89 92.86
bjp_ig2157_scaffold_5785
Species: RBG_13_Euryarchaeota_31_8_curated (50%)
4 3447 bp 53.64 6.74 93.04
bjp_ig2157_scaffold_1467 9 8794 bp 53.62 5.87 93.20
Displaying items 101-150 of 246 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.