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bjp_ig2157_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_41_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241..489)
DNA (249bp) protein (83aa)
hypothetical protein id=1266505 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EWS63566.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
bjp_ig2157_scaffold_41_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

672..3428
DNA (2757bp) protein (919aa)
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
Uncharacterized protein id=1266504 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
RTX toxins and related Ca2+-binding protein
bjp_ig2157_scaffold_41_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3480..4343)
DNA (864bp) protein (288aa)
hypothetical protein; K09933 hypothetical protein id=5083231 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein; K09933 hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_41_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4337..5179)
DNA (843bp) protein (281aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=GWE1_Burkholderiales_65_30_curated
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase id=1266502 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_41_5
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5179..5685)
DNA (507bp) protein (169aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=1266501 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_41_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5688..6305)
DNA (618bp) protein (206aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] id=5083228 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptidyl-prolyl isomerase (EC:5.2.1.8); K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] Tax=GWE1_Burkholderiales_65_30_curated
peptidyl-prolyl isomerase (EC:5.2.1.8)
bjp_ig2157_scaffold_41_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6305..7810)
DNA (1506bp) protein (502aa)
ErfK/YbiS/YcfS/YnhG id=5083227 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ErfK/YbiS/YcfS/YnhG Tax=GWE1_Burkholderiales_65_30_curated
ErfK/YbiS/YcfS/YnhG
bjp_ig2157_scaffold_41_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7810..8856)
DNA (1047bp) protein (349aa)
Tetratricopeptide repeat protein id=1266498 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_41_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9154..10542
DNA (1389bp) protein (463aa)
cysS; cysteinyl-tRNA ligase (EC:6.1.1.16) Tax=GWE1_Burkholderiales_65_30_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=1266497 bin=GWE1_Burkholderiales_65_30 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_41_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10542..11192
DNA (651bp) protein (217aa)
alkA; DNA glycosylase; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=GWE1_Burkholderiales_65_30_curated
HhH-GPD id=1266496 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
alkA; DNA glycosylase
bjp_ig2157_scaffold_41_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11302..12291
DNA (990bp) protein (330aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] id=5083223 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=GWE1_Burkholderiales_65_30_curated
accA; acetyl-CoA carboxylase alpha subunit
bjp_ig2157_scaffold_41_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12299..13303
DNA (1005bp) protein (335aa)
tRNA(Ile)-lysidine synthase id=1266494 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
tilS; tRNA(Ile)-lysidine synthetase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_41_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13406..14686
DNA (1281bp) protein (427aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] Tax=GWE1_Burkholderiales_65_30_curated
Aspartokinase id=1266493 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
aspartate kinase
bjp_ig2157_scaffold_41_trna_1
unknown

Not on your lists

14752..14841
DNA (90bp)
transferRNA
bjp_ig2157_scaffold_41_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14919..15827
DNA (909bp) protein (303aa)
hypothetical protein id=5083157 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_41_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15843..16304)
DNA (462bp) protein (154aa)
RNA-binding S4; K04762 ribosome-associated heat shock protein Hsp15 id=5083156 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
RNA-binding S4; K04762 ribosome-associated heat shock protein Hsp15 Tax=GWE1_Burkholderiales_65_30_curated
RNA-binding S4
bjp_ig2157_scaffold_41_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16322..17743)
DNA (1422bp) protein (474aa)
histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] id=5083155 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] Tax=GWE1_Burkholderiales_65_30_curated
signal transduction histidine kinase
bjp_ig2157_scaffold_41_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17740..18429)
DNA (690bp) protein (230aa)
Two component transcriptional regulator id=1266426 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
two component transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_41_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18653..19612
DNA (960bp) protein (320aa)
Uncharacterized protein id=1266425 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
tctC; extracytoplasmic binding receptor; K07795 putative tricarboxylic transport membrane protein Tax=GWE1_Burkholderiales_65_30_curated
tctC; extracytoplasmic binding receptor
bjp_ig2157_scaffold_41_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19689..20225
DNA (537bp) protein (179aa)
tctB; small integral membrane protein; K07794 putative tricarboxylic transport membrane protein id=5083152 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
tctB; small integral membrane protein; K07794 putative tricarboxylic transport membrane protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_41_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20256..21749
DNA (1494bp) protein (498aa)
TctA id=1266423 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=GWE1_Burkholderiales_65_30_curated
uncharacterized protein conserved in bacteria
bjp_ig2157_scaffold_41_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22042..22680
DNA (639bp) protein (213aa)
hypothetical protein; K07025 putative hydrolase of the HAD superfamily id=5083150 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein; K07025 putative hydrolase of the HAD superfamily Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_41_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22811..24304
DNA (1494bp) protein (498aa)
signal transduction protein id=5083149 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
signal transduction protein Tax=GWE1_Burkholderiales_65_30_curated
signal transduction protein
bjp_ig2157_scaffold_41_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24470..25660
DNA (1191bp) protein (397aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=1266420 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
extracellular ligand-binding receptor Tax=GWE1_Burkholderiales_65_30_curated
extracellular ligand-binding receptor
bjp_ig2157_scaffold_41_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25823..26590
DNA (768bp) protein (256aa)
ABC transporter (EC:3.6.3.-); K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter (EC:3.6.3.-)
ABC transporter-like protein id=1266419 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_41_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26587..27324
DNA (738bp) protein (246aa)
ABC transporter (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein id=5083146 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC transporter (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter (EC:3.6.3.-)
bjp_ig2157_scaffold_41_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27321..28307
DNA (987bp) protein (329aa)
Inner-membrane translocator id=1266417 bin=GWE1_Burkholderiales_65_30 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
inner-membrane translocator Tax=GWE1_Burkholderiales_65_30_curated
inner-membrane translocator
bjp_ig2157_scaffold_41_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28321..29421
DNA (1101bp) protein (367aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=5083144 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative ABC transporter, permease protein Tax=GWE1_Burkholderiales_65_30_curated
putative ABC transporter, permease protein
bjp_ig2157_scaffold_41_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29418..30290
DNA (873bp) protein (291aa)
Alpha/beta hydrolase fold protein id=1266415 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
alpha/beta fold family hydrolase Tax=GWE1_Burkholderiales_65_30_curated
alpha/beta fold family hydrolase
bjp_ig2157_scaffold_41_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30301..30516)
DNA (216bp) protein (72aa)
hypothetical protein id=5083142 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
Displaying items 1-30 of 142 in total

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