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bjp_ig2157_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_138_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)
hypothetical protein id=5081591 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_138_2
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404..1012)
DNA (609bp) protein (203aa)
Sel1-like repeat-containing protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YYH9_9RHOO
Sel1-like repeat-containing protein {ECO:0000313|EMBL:ENO87208.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linalo
Sel1-like repeat protein
bjp_ig2157_scaffold_138_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1161..2585)
DNA (1425bp) protein (475aa)
dld; D-lactate dehydrogenase (cytochrome); K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] id=5081593 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
dld; D-lactate dehydrogenase (cytochrome)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_138_4

Not on your lists

2862..4133
DNA (1272bp) protein (424aa)
Adhesin MafA2 n=1 Tax=uncultured bacterium RepID=K1ZAB4_9BACT
Adhesin MafA2 {ECO:0000313|EMBL:EKD34864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2157_scaffold_138_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4198..4764
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKV5_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93642.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
bjp_ig2157_scaffold_138_6
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4839..8504
DNA (3666bp) protein (1222aa)
Filamentous hemagglutinin, intein-containing n=2 Tax=Pseudomonas syringae pv. actinidiae RepID=S6NHI2_PSESF
Peptidase, C39 family {ECO:0000313|EMBL:EHM55870.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacter
bjp_ig2157_scaffold_138_7
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9007..9465
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D6J2_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
bjp_ig2157_scaffold_138_8
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9749..10708
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Acinetobacter radioresistens RepID=D0T680_ACIRA
Uncharacterized protein {ECO:0000313|EMBL:KCX38475.1}; TaxID=1310678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/
bjp_ig2157_scaffold_138_9
unknown

Not on your lists

comp(10809..11045)
DNA (237bp) protein (79aa)

This feature has no annotations

bjp_ig2157_scaffold_138_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11248..11814
DNA (567bp) protein (189aa)
ATP:cob(I)alamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] id=5081595 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ATP--cobalamin adenosyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_138_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11814..12200
DNA (387bp) protein (129aa)
Uncharacterized protein id=1278980 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_138_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12248..13366)
DNA (1119bp) protein (373aa)
Twitching motility protein id=1278977 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
twitching motility protein; K02670 twitching motility protein PilU Tax=GWE1_Burkholderiales_65_30_curated
twitching motility protein
bjp_ig2157_scaffold_138_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13448..13870)
DNA (423bp) protein (141aa)
phenylacetic acid degradation-like protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Phenylacetic acid degradation-related protein id=1278976 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
phenylacetic acid degradation-like protein
bjp_ig2157_scaffold_138_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13982..14377)
DNA (396bp) protein (132aa)
hypothetical protein id=5081601 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
bjp_ig2157_scaffold_138_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14443..15021)
DNA (579bp) protein (193aa)
intracellular protease PfpI family; K05520 protease I [EC:3.2.-.-] Tax=GWE1_Burkholderiales_65_30_curated
Intracellular protease, PfpI family id=1278974 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
glutamine amidotransferase
bjp_ig2157_scaffold_138_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15197..16549)
DNA (1353bp) protein (451aa)
Uracil-xanthine permease {ECO:0000313|EMBL:EIK92950.1}; EC=1.11.1.9 {ECO:0000313|EMBL:EIK92950.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Uracil-xanthine permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUR0_9BURK rbh
uracil-xanthine permease
bjp_ig2157_scaffold_138_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16642..17127)
DNA (486bp) protein (162aa)
hypothetical protein id=5081605 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_138_18
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17147..18478)
DNA (1332bp) protein (444aa)
fumarylacetoacetase (EC:3.7.1.2)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZX64_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI52275.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. E
bjp_ig2157_scaffold_138_19
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18475..19284)
DNA (810bp) protein (270aa)
Cyclase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2BAN8_9PSED rbh
Cyclase {ECO:0000313|EMBL:ERI52276.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
cyclase family protein
bjp_ig2157_scaffold_138_20
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19327..20640)
DNA (1314bp) protein (438aa)
TRAP transporter, DctM-like membrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH6_TISMK rbh
siaT; TRAP transporter, DctM-like membrane protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
siaT; TRAP transporter, DctM-like membrane protein rbh
bjp_ig2157_scaffold_138_21
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20651..21253)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH7_TISMK
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
bjp_ig2157_scaffold_138_22
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21272..22345)
DNA (1074bp) protein (358aa)
C4-dicarboxylate-binding periplasmic protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH8_TISMK rbh
dctP; C4-dicarboxylate-binding periplasmic protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
dctP; C4-dicarboxylate-binding periplasmic protein
bjp_ig2157_scaffold_138_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22342..23106)
DNA (765bp) protein (255aa)
Regulatory protein TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZ14_VARPE
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADU34343.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
bjp_ig2157_scaffold_138_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23210..25408
DNA (2199bp) protein (733aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:EIK92948.1}; EC=6.2.1.16 {ECO:0000313|EMBL:EIK92948.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
acetoacetyl-CoA synthetase (EC:6.2.1.1)
Acetoacetyl-CoA synthetase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZU74_9PSED rbh
bjp_ig2157_scaffold_138_25
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25576..26580
DNA (1005bp) protein (335aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
tctC; extracytoplasmic binding receptor id=5081608 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
tctC; extracytoplasmic binding receptor
bjp_ig2157_scaffold_138_26
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26654..27727)
DNA (1074bp) protein (358aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK04_9BURK
Multidrug transporter {ECO:0000313|EMBL:KGM40496.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
bjp_ig2157_scaffold_138_27
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27764..28435)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6ZA65_9RHOO
Putative transmembrane anchor protein {ECO:0000313|EMBL:KIN91887.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp.
hypothetical protein
bjp_ig2157_scaffold_138_28
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28448..29143)
DNA (696bp) protein (232aa)
membrane protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036F6487 rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
membrane protein
bjp_ig2157_scaffold_138_29
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29140..29415)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AN4_POLSJ
NreA {ECO:0000313|EMBL:KDP94564.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
hypothetical protein
bjp_ig2157_scaffold_138_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29532..29969)
DNA (438bp) protein (146aa)
MerR family transcriptional regulator n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00036766D2
MerR family transcriptional regulator
MerR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 66 in total

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