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bjp_ig2157_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_163_trna_1
unknown

Not on your lists

18..90
DNA (73bp)
transferRNA
bjp_ig2157_scaffold_163_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179..622)
DNA (444bp) protein (148aa)
NifQ family protein; K15790 nitrogen fixation protein NifQ id=5079842 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NifQ family protein; K15790 nitrogen fixation protein NifQ Tax=GWE1_Burkholderiales_65_30_curated
NifQ family protein
bjp_ig2157_scaffold_163_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(629..940)
DNA (312bp) protein (104aa)
4Fe-4S ferredoxin id=5079841 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ferredoxin III Tax=GWE1_Burkholderiales_65_30_curated
ferredoxin III
bjp_ig2157_scaffold_163_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(952..1155)
DNA (204bp) protein (68aa)
hypothetical protein id=5079840 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_163_4
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..1646)
DNA (489bp) protein (163aa)
Putative nitrogen fixation protein {ECO:0000313|EMBL:EWS63861.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
Putative uncharacterized protein id=1262399 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
bjp_ig2157_scaffold_163_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1643..2053)
DNA (411bp) protein (137aa)
nitrogen fixation protein NifX; K02596 nitrogen fixation protein NifX id=5079838 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
nitrogen fixation protein NifX; K02596 nitrogen fixation protein NifX Tax=GWE1_Burkholderiales_65_30_curated
nitrogen fixation protein NifX
bjp_ig2157_scaffold_163_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2068..3465)
DNA (1398bp) protein (466aa)
nitrogenase molybdenum-cofactor biosynthesis protein NifN (EC:1.18.6.1); K02592 nitrogenase molybdenum-iron protein NifN id=5079837 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nitrogenase molybdenum-cofactor biosynthesis protein NifN (EC:1.18.6.1); K02592 nitrogenase molybdenum-iron protein NifN Tax=GWE1_Burkholderiales_65_30_curated
nitrogenase molybdenum-cofactor biosynthesis protein NifN (EC:1.18.6.1)
bjp_ig2157_scaffold_163_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3488..4990)
DNA (1503bp) protein (501aa)
nitrogenase molybdenum-cofactor biosynthesis protein NifE (EC:1.18.6.1); K02587 nitrogenase molybdenum-cofactor synthesis protein NifE id=5079836 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nitrogenase molybdenum-cofactor biosynthesis protein NifE (EC:1.18.6.1); K02587 nitrogenase molybdenum-cofactor synthesis protein NifE Tax=GWE1_Burkholderiales_65_30_curated
nitrogenase molybdenum-cofactor biosynthesis protein NifE (EC:1.18.6.1)
bjp_ig2157_scaffold_163_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..5629)
DNA (480bp) protein (160aa)
hypothetical protein id=5079835 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_163_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5646..6002)
DNA (357bp) protein (119aa)
hypothetical protein id=5079834 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_163_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5999..7705)
DNA (1707bp) protein (569aa)
ATPase central domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
AAA ATPase, central domain protein id=1262393 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ATPase central domain-containing protein
bjp_ig2157_scaffold_163_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..8211)
DNA (486bp) protein (162aa)
hypothetical protein id=5079832 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_163_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8320..8637)
DNA (318bp) protein (106aa)
hypothetical protein id=5079831 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_163_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8640..8987)
DNA (348bp) protein (116aa)
Ferredoxin id=1262390 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ferredoxin Tax=GWE1_Burkholderiales_65_30_curated
ferredoxin
bjp_ig2157_scaffold_163_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9135..10694)
DNA (1560bp) protein (520aa)
nitrogenase molybdenum-iron protein subunit beta (EC:1.18.6.1); K02591 nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] Tax=GWE1_Burkholderiales_65_30_curated
nitrogenase molybdenum-iron protein subunit beta (EC:1.18.6.1)
Mo-nitrogenase MoFe protein subunit NifK id=1262389 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_163_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10764..12227)
DNA (1464bp) protein (488aa)
nitrogenase molybdenum-iron protein subunit alpha (EC:1.18.6.1); K02586 nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] Tax=GWE1_Burkholderiales_65_30_curated
nitrogenase molybdenum-iron protein subunit alpha (EC:1.18.6.1)
Nitrogenase protein alpha chain id=1262388 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_163_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12315..13208)
DNA (894bp) protein (298aa)
nifH; nitrogenase reductase (EC:1.18.6.1); K02588 nitrogenase iron protein NifH [EC:1.18.6.1] id=5079827 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nifH; nitrogenase reductase (EC:1.18.6.1); K02588 nitrogenase iron protein NifH [EC:1.18.6.1] Tax=GWE1_Burkholderiales_65_30_curated
nifH; nitrogenase reductase (EC:1.18.6.1)
bjp_ig2157_scaffold_163_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13589..14047
DNA (459bp) protein (153aa)
globin; K06886 hemoglobin id=5079826 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
globin; K06886 hemoglobin Tax=GWE1_Burkholderiales_65_30_curated
globin
bjp_ig2157_scaffold_163_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14044..14652
DNA (609bp) protein (203aa)
Putative uncharacterized protein id=1262385 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_163_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14786..15631
DNA (846bp) protein (282aa)
draT; ADP-ribosyltransferase DraT (EC:2.4.2.37); K05951 NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] id=5079824 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
draT; ADP-ribosyltransferase DraT (EC:2.4.2.37); K05951 NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] Tax=GWE1_Burkholderiales_65_30_curated
draT; ADP-ribosyltransferase DraT (EC:2.4.2.37)
bjp_ig2157_scaffold_163_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15624..16553
DNA (930bp) protein (310aa)
draG; ADP-ribosyl-[dinitrogen reductase] glycohydrolase DraG (EC:3.2.-.-); K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-] id=5079823 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
draG; ADP-ribosyl-[dinitrogen reductase] glycohydrolase DraG (EC:3.2.-.-); K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-] Tax=GWE1_Burkholderiales_65_30_curated
draG; ADP-ribosyl-[dinitrogen reductase] glycohydrolase DraG (EC:3.2.-.-)
bjp_ig2157_scaffold_163_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..18159
DNA (1614bp) protein (538aa)
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
Putative uncharacterized protein id=1262382 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
bjp_ig2157_scaffold_163_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..18983
DNA (828bp) protein (276aa)
ankyrin id=5079821 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ankyrin Tax=GWE1_Burkholderiales_65_30_curated
ankyrin
bjp_ig2157_scaffold_163_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18980..19429
DNA (450bp) protein (150aa)
Nitrogenase-associated protein id=1262380 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
nitrogenase-associated protein Tax=GWE1_Burkholderiales_65_30_curated
nitrogenase-associated protein
bjp_ig2157_scaffold_163_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19416..19664
DNA (249bp) protein (83aa)
FmdB family regulatory protein id=5079819 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
FmdB family regulatory protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_163_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19666..20343
DNA (678bp) protein (226aa)
OsmC family protein id=1262378 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
OsmC family protein; K04063 osmotically inducible protein OsmC Tax=GWE1_Burkholderiales_65_30_curated
OsmC family protein
bjp_ig2157_scaffold_163_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20367..21113
DNA (747bp) protein (249aa)
hypothetical protein id=5079816 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_163_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21094..21798)
DNA (705bp) protein (235aa)
YecA; K07039 uncharacterized protein id=5079815 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
YecA; K07039 uncharacterized protein Tax=GWE1_Burkholderiales_65_30_curated
YecA
bjp_ig2157_scaffold_163_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21795..23327)
DNA (1533bp) protein (511aa)
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein id=5079814 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
bjp_ig2157_scaffold_163_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23497..24141
DNA (645bp) protein (215aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] id=5079813 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=GWE1_Burkholderiales_65_30_curated
glutathione S-transferase domain-containing protein
Displaying items 1-30 of 75 in total

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