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bjp_ig2157_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_178_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..931)
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS63394.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
hypothetical protein id=5081537 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
bjp_ig2157_scaffold_178_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(987..2687)
DNA (1701bp) protein (567aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-); K03688 ubiquinone biosynthesis protein id=5081538 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
2-octaprenylphenol hydroxylase Tax=GWE1_Burkholderiales_65_30_curated
2-octaprenylphenol hydroxylase
bjp_ig2157_scaffold_178_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2847..3107)
DNA (261bp) protein (87aa)
Cell division topological specificity factor id=1279037 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
cell division topological specificity factor MinE
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_178_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3110..3925)
DNA (816bp) protein (272aa)
septum site-determining protein MinD; K03609 septum site-determining protein MinD id=5081540 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
septum site-determining protein MinD; K03609 septum site-determining protein MinD Tax=GWE1_Burkholderiales_65_30_curated
septum site-determining protein MinD
bjp_ig2157_scaffold_178_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3977..4771)
DNA (795bp) protein (265aa)
Probable septum site-determining protein MinC id=1279035 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
minC; septum formation inhibitor; K03610 septum site-determining protein MinC Tax=GWE1_Burkholderiales_65_30_curated
minC; septum formation inhibitor
bjp_ig2157_scaffold_178_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5091..5978
DNA (888bp) protein (296aa)
UbiA prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] id=5081542 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
UbiA prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] Tax=GWE1_Burkholderiales_65_30_curated
UbiA prenyltransferase
bjp_ig2157_scaffold_178_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6692..9370)
DNA (2679bp) protein (893aa)
N-acetyltransferase GCN5; K09181 hypothetical protein id=5081543 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
N-acetyltransferase GCN5; K09181 hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
N-acetyltransferase GCN5
bjp_ig2157_scaffold_178_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9409..10404)
DNA (996bp) protein (332aa)
histone deacetylase superfamily protein id=5081544 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histone deacetylase superfamily protein Tax=GWE1_Burkholderiales_65_30_curated
histone deacetylase superfamily protein
bjp_ig2157_scaffold_178_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10621..11835)
DNA (1215bp) protein (405aa)
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase id=1279031 bin=GWE1_Burkholderiales_65_30 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase Tax=GWE1_Burkholderiales_65_30_curated
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase
bjp_ig2157_scaffold_178_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11938..12567)
DNA (630bp) protein (210aa)
hypothetical protein id=5081546 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_178_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12729..13247)
DNA (519bp) protein (173aa)
MerR family transcriptional regulator id=5081547 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
MerR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
MerR family transcriptional regulator
bjp_ig2157_scaffold_178_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13249..13446)
DNA (198bp) protein (66aa)
copper-transporting ATPase; K07213 copper chaperone id=5081548 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
copper-transporting ATPase; K07213 copper chaperone Tax=GWE1_Burkholderiales_65_30_curated
copper-transporting ATPase
bjp_ig2157_scaffold_178_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13584..15971
DNA (2388bp) protein (796aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5081549 bin=GWF1_Burkholderiales_GWF1_66_17 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=GWE1_Burkholderiales_65_30_curated
heavy metal translocating P-type ATPase
bjp_ig2157_scaffold_178_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16139..16735
DNA (597bp) protein (199aa)
hemerythrin HHE cation-binding region id=5081550 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hemerythrin HHE cation-binding region Tax=GWE1_Burkholderiales_65_30_curated
hemerythrin HHE cation-binding region
bjp_ig2157_scaffold_178_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16914..17501
DNA (588bp) protein (196aa)
id=5081551 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
id=5081551 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_178_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17558..18805
DNA (1248bp) protein (416aa)
transporter id=5081552 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
transporter Tax=GWE1_Burkholderiales_65_30_curated
transporter
bjp_ig2157_scaffold_178_17
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18855..19313)
DNA (459bp) protein (153aa)
Aminoglycoside N(6')-acetyltransferase type 1 {ECO:0000313|EMBL:EWS62320.1}; EC=2.3.1.82 {ECO:0000313|EMBL:EWS62320.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
hypothetical protein id=5081553 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
bjp_ig2157_scaffold_178_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19402..20013)
DNA (612bp) protein (204aa)
Glutathione S-transferase domain-containing protein id=1279022 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glutathione S-transferase domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
glutathione S-transferase domain-containing protein
bjp_ig2157_scaffold_178_19
unknown

Not on your lists

20029..20172
DNA (144bp) protein (48aa)

This feature has no annotations

bjp_ig2157_scaffold_178_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20235..21158
DNA (924bp) protein (308aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=GWE1_Burkholderiales_65_30_curated
Agmatinase id=1279021 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
agmatinase
bjp_ig2157_scaffold_178_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21303..22616
DNA (1314bp) protein (438aa)
FAD dependent oxidoreductase; K09471 gamma-glutamylputrescine oxidase [EC:1.4.3.-] Tax=GWE1_Burkholderiales_65_30_curated
FAD dependent oxidoreductase id=1279020 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
FAD dependent oxidoreductase
bjp_ig2157_scaffold_178_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22638..24059)
DNA (1422bp) protein (474aa)
hypothetical protein id=5081557 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
17 kDa surface antigen Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_178_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24149..24376)
DNA (228bp) protein (76aa)
id=5081558 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5081558 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_178_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24678..26087
DNA (1410bp) protein (470aa)
histidine kinase id=5081559 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
histidine kinase
bjp_ig2157_scaffold_178_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26105..27517
DNA (1413bp) protein (471aa)
sigma54-dependent response regulator, two-component id=5081560 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sigma54-dependent response regulator, two-component Tax=GWE1_Burkholderiales_65_30_curated
sigma54-dependent response regulator, two-component
bjp_ig2157_scaffold_178_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27533..29023)
DNA (1491bp) protein (497aa)
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase id=5081561 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase Tax=GWE1_Burkholderiales_65_30_curated
GntR family transcriptional regulator
bjp_ig2157_scaffold_178_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29156..29968
DNA (813bp) protein (271aa)
peptidase C26; K07010 putative glutamine amidotransferase id=5081562 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
predicted glutamine amidotransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_178_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30029..31399
DNA (1371bp) protein (457aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=GWE1_Burkholderiales_65_30_curated
glutamate--ammonia ligase (EC:6.3.1.2)
Glutamate--ammonia ligase id=1279013 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_178_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31526..32965
DNA (1440bp) protein (480aa)
putative aminotransferase; K12256 putrescine aminotransferase [EC:2.6.1.-] Tax=GWE1_Burkholderiales_65_30_curated
Putative aminotransferase id=1279012 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
putative aminotransferase
bjp_ig2157_scaffold_178_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33164..34342
DNA (1179bp) protein (393aa)
Putrescine-binding periplasmic protein id=1279011 bin=GWE1_Burkholderiales_65_30 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
extracellular solute-binding protein; K11073 putrescine transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
extracellular solute-binding protein
Displaying items 1-30 of 51 in total

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