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bjp_ig2157_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_239_1
Pseudoxanthomonas mexicana, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..815)
DNA (813bp) protein (271aa)
dipeptidyl peptidase IV (EC:3.4.14.5)
Dipeptidyl aminopeptidase IV n=1 Tax=Pseudomonas sp. WO24 RepID=Q6F3I7_9PSED
Dipeptidyl aminopeptidase IV {ECO:0000313|EMBL:BAD27580.1}; TaxID=128785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudox
bjp_ig2157_scaffold_239_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

843..1700
DNA (858bp) protein (286aa)
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein id=5082552 bin=GWF1_Burkholderiales_GWF1_66_17 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
bjp_ig2157_scaffold_239_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1751..2632
DNA (882bp) protein (294aa)
patatin id=5082553 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
patatin Tax=GWE1_Burkholderiales_65_30_curated
patatin
bjp_ig2157_scaffold_239_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2649..2840)
DNA (192bp) protein (64aa)
id=5082554 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082554 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_239_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3290..3940)
DNA (651bp) protein (217aa)
hypothetical protein id=5082555 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4069..5364)
DNA (1296bp) protein (432aa)
hypothetical protein id=5082556 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5361..5993)
DNA (633bp) protein (211aa)
type 11 methyltransferase id=5082557 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
type 11 methyltransferase Tax=GWE1_Burkholderiales_65_30_curated
type 11 methyltransferase
bjp_ig2157_scaffold_239_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6014..6841)
DNA (828bp) protein (276aa)
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein id=5082558 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
phosphonate ABC transporter inner membrane subunit
bjp_ig2157_scaffold_239_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6838..7686)
DNA (849bp) protein (283aa)
binding-protein-dependent transport system inner membrane protein; K02042 phosphonate transport system permease protein id=5082559 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
binding-protein-dependent transport system inner membrane protein; K02042 phosphonate transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
binding-protein-dependent transport system inner membrane protein
bjp_ig2157_scaffold_239_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7867..8697)
DNA (831bp) protein (277aa)
ABC transporter-like protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28] id=5082560 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC transporter-like protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28] Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter-like protein
bjp_ig2157_scaffold_239_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8713..9576)
DNA (864bp) protein (288aa)
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein id=5082561 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
phosphonate ABC transporter periplasmic phosphonate-binding protein
bjp_ig2157_scaffold_239_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9741..10742
DNA (1002bp) protein (334aa)
hypothetical protein id=5082562 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10899..11405
DNA (507bp) protein (169aa)
hypothetical protein id=5082563 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11436..12644)
DNA (1209bp) protein (403aa)
Uncharacterized protein id=1274813 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12670..13650
DNA (981bp) protein (327aa)
group 1 glycosyl transferase id=5082565 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
group 1 glycosyl transferase Tax=GWE1_Burkholderiales_65_30_curated
group 1 glycosyl transferase
bjp_ig2157_scaffold_239_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13712..14785
DNA (1074bp) protein (358aa)
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3] id=5082566 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3] Tax=GWE1_Burkholderiales_65_30_curated
selenophosphate synthetase (EC:2.7.9.3)
bjp_ig2157_scaffold_239_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14809..15483
DNA (675bp) protein (225aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5082567 bin=GWF1_Burkholderiales_GWF1_66_17 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
signal peptidase I (EC:3.4.21.89)
bjp_ig2157_scaffold_239_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15539..15844
DNA (306bp) protein (102aa)
hypothetical protein id=5082568 bin=GWF1_Burkholderiales_GWF1_66_17 species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15855..16316
DNA (462bp) protein (154aa)
S-isoprenylcysteine methyltransferase-like protein id=5082569 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
S-isoprenylcysteine methyltransferase-like protein Tax=GWE1_Burkholderiales_65_30_curated
S-isoprenylcysteine methyltransferase-like protein
bjp_ig2157_scaffold_239_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16338..17036
DNA (699bp) protein (233aa)
haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] id=5082570 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=GWE1_Burkholderiales_65_30_curated
haloacid dehalogenase
bjp_ig2157_scaffold_239_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17166..17825
DNA (660bp) protein (220aa)
ArsR family transcriptional regulator id=5082571 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ArsR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
ArsR family transcriptional regulator
bjp_ig2157_scaffold_239_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17835..18710
DNA (876bp) protein (292aa)
fatty acid hydroxylase id=5082572 bin=GWF1_Burkholderiales_GWF1_66_17 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
fatty acid hydroxylase Tax=GWE1_Burkholderiales_65_30_curated
fatty acid hydroxylase
bjp_ig2157_scaffold_239_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18826..19290
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002ECF265
rhodanese domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
rhodanese domain-containing protein
bjp_ig2157_scaffold_239_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19329..20315
DNA (987bp) protein (329aa)
beta-lactamase id=5082574 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
beta-lactamase Tax=GWE1_Burkholderiales_65_30_curated
beta-lactamase
bjp_ig2157_scaffold_239_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20346..20666)
DNA (321bp) protein (107aa)
hypothetical protein id=5082575 bin=GWF1_Burkholderiales_GWF1_66_17 species=Sphingobium sp. AP49 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20923..21303
DNA (381bp) protein (127aa)
hypothetical protein id=5082577 bin=GWF1_Burkholderiales_GWF1_66_17 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21353..22705)
DNA (1353bp) protein (451aa)
hypothetical protein id=5082578 bin=GWF1_Burkholderiales_GWF1_66_17 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_239_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23118..23510)
DNA (393bp) protein (131aa)
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 18 id=5082579 bin=GWF1_Burkholderiales_GWF1_66_17 species=Achromobacter piechaudii genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 18 Tax=GWE1_Burkholderiales_65_30_curated
glyoxalase
bjp_ig2157_scaffold_239_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24188..25423)
DNA (1236bp) protein (412aa)
chromate transporter; K07240 chromate transporter id=5082580 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative chromate transport protein Tax=GWE1_Burkholderiales_65_30_curated
chromate transporter
bjp_ig2157_scaffold_239_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25401..26594)
DNA (1194bp) protein (398aa)
pyridine nucleotide-disulfide oxidoreductase family protein id=5082581 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
pyridine nucleotide-disulfide oxidoreductase family protein Tax=GWE1_Burkholderiales_65_30_curated
pyridine nucleotide-disulfide oxidoreductase family protein
Displaying items 1-30 of 46 in total

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