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bjp_ig2157_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_242_1
unknown

Not on your lists

comp(395..547)
DNA (153bp) protein (51aa)

This feature has no annotations

bjp_ig2157_scaffold_242_trna_2
unknown

Not on your lists

comp(836..908)
DNA (73bp)
transferRNA
bjp_ig2157_scaffold_242_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(965..2866)
DNA (1902bp) protein (634aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=GWE1_Burkholderiales_65_30_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=1262294 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
bjp_ig2157_scaffold_242_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3589..3990
DNA (402bp) protein (134aa)
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase id=5079734 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase Tax=GWE1_Burkholderiales_65_30_curated
GreA/GreB family elongation factor
bjp_ig2157_scaffold_242_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4066..4929
DNA (864bp) protein (288aa)
uspa domain-containing protein id=5079733 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
uspa domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
uspa domain-containing protein
bjp_ig2157_scaffold_242_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4937..5467
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=1262291 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_242_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5460..6158
DNA (699bp) protein (233aa)
hypothetical protein id=5079731 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_242_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6223..7371
DNA (1149bp) protein (383aa)
cytochrome c oxidase accessory protein CcoG id=5079730 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome c oxidase accessory protein CcoG Tax=GWE1_Burkholderiales_65_30_curated
cytochrome c oxidase accessory protein CcoG
bjp_ig2157_scaffold_242_trna_1
unknown

Not on your lists

comp(7462..7534)
DNA (73bp)
transferRNA
bjp_ig2157_scaffold_242_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7558..7830)
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta id=1262288 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
nucleoid protein Hbs
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_242_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8119..9213)
DNA (1095bp) protein (365aa)
tartrate dehydrogenase; K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] id=5079728 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
tartrate dehydrogenase Tax=GWE1_Burkholderiales_65_30_curated
tartrate dehydrogenase
bjp_ig2157_scaffold_242_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9230..10108)
DNA (879bp) protein (293aa)
alpha/beta hydrolase fold protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] id=5079727 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
alpha/beta hydrolase fold protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] Tax=GWE1_Burkholderiales_65_30_curated
alpha/beta hydrolase fold protein
bjp_ig2157_scaffold_242_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10174..11142
DNA (969bp) protein (323aa)
LysR family transcriptional regulator id=1262285 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_242_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11099..11992)
DNA (894bp) protein (298aa)
hypothetical protein id=5079725 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_242_13
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11992..12561)
DNA (570bp) protein (190aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EWS63409.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EWS63409.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteo
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=1262283 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_242_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12779..14479
DNA (1701bp) protein (567aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=5079723 bin=GWF1_Burkholderiales_GWF1_66_17 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
adenylate/guanylate cyclase with integral membrane sensor Tax=GWE1_Burkholderiales_65_30_curated
adenylate/guanylate cyclase with integral membrane sensor
bjp_ig2157_scaffold_242_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14500..16551)
DNA (2052bp) protein (684aa)
UvrABC system protein C id=1262281 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
uvrC; excinuclease ABC subunit C Tax=GWE1_Burkholderiales_65_30_curated
uvrC; excinuclease ABC subunit C
bjp_ig2157_scaffold_242_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16614..17744
DNA (1131bp) protein (377aa)
hypothetical protein id=5079721 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_242_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17894..18448
DNA (555bp) protein (185aa)
translation elongation factor P; K02356 elongation factor P id=5079720 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
translation elongation factor P
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_242_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18591..19469
DNA (879bp) protein (293aa)
malonate transporter; K07088 id=5079719 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
malonate transporter; K07088 Tax=GWE1_Burkholderiales_65_30_curated
malonate transporter
bjp_ig2157_scaffold_242_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19526..20398
DNA (873bp) protein (291aa)
Uncharacterized protein id=1262277 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein; K06966 Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_242_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20511..21899)
DNA (1389bp) protein (463aa)
RND efflux system, outer membrane lipoprotein, NodT id=1262276 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
RND efflux system outer membrane lipoprotein NodT Tax=GWE1_Burkholderiales_65_30_curated
RND efflux system outer membrane lipoprotein NodT
bjp_ig2157_scaffold_242_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22128..25274)
DNA (3147bp) protein (1049aa)
hydrophobe/amphiphile efflux-1 (HAE1) family protein Tax=GWE1_Burkholderiales_65_30_curated
Hydrophobe/amphiphile efflux-1 HAE1 protein id=1262275 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hydrophobe/amphiphile efflux-1 (HAE1) family protein
bjp_ig2157_scaffold_242_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25369..26649)
DNA (1281bp) protein (427aa)
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=5079715 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
RND family efflux transporter MFP subunit; K03585 membrane fusion protein Tax=GWE1_Burkholderiales_65_30_curated
RND family efflux transporter MFP subunit
bjp_ig2157_scaffold_242_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26828..27571
DNA (744bp) protein (248aa)
acrR; transcriptional regulator AcrR; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor id=5079714 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acrR; transcriptional regulator AcrR; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=GWE1_Burkholderiales_65_30_curated
acrR; transcriptional regulator AcrR
bjp_ig2157_scaffold_242_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27444..27785)
DNA (342bp) protein (114aa)
phaG; monovalent cation/H+ antiporter subunit G; K05564 multicomponent K+:H+ antiporter subunit G id=5079713 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phaG; monovalent cation/H+ antiporter subunit G; K05564 multicomponent K+:H+ antiporter subunit G Tax=GWE1_Burkholderiales_65_30_curated
phaG; monovalent cation/H+ antiporter subunit G
bjp_ig2157_scaffold_242_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27799..28074)
DNA (276bp) protein (92aa)
multisubunit Na+/H+ antiporter subunit MnhF; K05563 multicomponent K+:H+ antiporter subunit F id=5079712 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
multicomponent K+:H+ antiporter subunit F; K05563 multicomponent K+:H+ antiporter subunit F Tax=GWE1_Burkholderiales_65_30_curated
multisubunit Na+/H+ antiporter subunit MnhF
bjp_ig2157_scaffold_242_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28071..28622)
DNA (552bp) protein (184aa)
K(+)/H(+) antiporter subunit E; K05562 multicomponent K+:H+ antiporter subunit E id=5079711 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
K(+)/H(+) antiporter subunit E; K05562 multicomponent K+:H+ antiporter subunit E Tax=GWE1_Burkholderiales_65_30_curated
K(+)/H(+) antiporter subunit E
bjp_ig2157_scaffold_242_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28619..30295)
DNA (1677bp) protein (559aa)
Putative monovalent cation/H+ antiporter subunit D id=1262269 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
monovalent cation/H+ antiporter subunit D Tax=GWE1_Burkholderiales_65_30_curated
monovalent cation/H+ antiporter subunit D
bjp_ig2157_scaffold_242_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30295..30684)
DNA (390bp) protein (130aa)
phaC; monovalent cation/H+ antiporter subunit C; K05560 multicomponent K+:H+ antiporter subunit C id=5079709 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phaC; monovalent cation/H+ antiporter subunit C; K05560 multicomponent K+:H+ antiporter subunit C Tax=GWE1_Burkholderiales_65_30_curated
phaC; monovalent cation/H+ antiporter subunit C
Displaying items 1-30 of 40 in total

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