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bjp_ig2157_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_255_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1078
DNA (1077bp) protein (359aa)
Fis family GAF modulated sigma54 specific transcriptional regulator id=5081613 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Fis family GAF modulated sigma54 specific transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
Fis family GAF modulated sigma54 specific transcriptional regulator
bjp_ig2157_scaffold_255_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1268..3064
DNA (1797bp) protein (599aa)
potassium transport flavoprotein; K07222 putative flavoprotein involved in K+ transport id=5081614 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
potassium transport flavoprotein; K07222 putative flavoprotein involved in K+ transport Tax=GWE1_Burkholderiales_65_30_curated
potassium transport flavoprotein
bjp_ig2157_scaffold_255_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3085..3984)
DNA (900bp) protein (300aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Transporter id=1278960 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
bjp_ig2157_scaffold_255_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4041..5042)
DNA (1002bp) protein (334aa)
flavin reductase-like protein id=5081617 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
flavin reductase-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_255_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5131..6180
DNA (1050bp) protein (350aa)
hypothetical protein id=5081618 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
peptidase M29
bjp_ig2157_scaffold_255_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6180..6992
DNA (813bp) protein (271aa)
beta-ketoadipate enol-lactone hydrolase id=5081619 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
beta-ketoadipate enol-lactone hydrolase Tax=GWE1_Burkholderiales_65_30_curated
beta-ketoadipate enol-lactone hydrolase
bjp_ig2157_scaffold_255_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7024..8292
DNA (1269bp) protein (423aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) id=5081620 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWE1_Burkholderiales_65_30_curated
BEC protein
bjp_ig2157_scaffold_255_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8374..9306
DNA (933bp) protein (311aa)
peptidase M14, carboxypeptidase A id=5081621 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptidase M14, carboxypeptidase A Tax=GWE1_Burkholderiales_65_30_curated
peptidase M14, carboxypeptidase A
bjp_ig2157_scaffold_255_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9375..10931)
DNA (1557bp) protein (519aa)
Sodium:alanine symporter family protein id=1278954 bin=GWE1_Burkholderiales_65_30 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
sodium:alanine symporter family protein; K03310 alanine or glycine:cation symporter, AGCS family Tax=GWE1_Burkholderiales_65_30_curated
sodium:alanine symporter family protein
bjp_ig2157_scaffold_255_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11059..12417)
DNA (1359bp) protein (453aa)
D-amino-acid dehydrogenase id=1278953 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
D-amino-acid dehydrogenase Tax=GWE1_Burkholderiales_65_30_curated
D-amino-acid dehydrogenase
bjp_ig2157_scaffold_255_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12601..13521
DNA (921bp) protein (307aa)
LysR family transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor id=5081624 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_255_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13564..14016)
DNA (453bp) protein (151aa)
hypothetical protein id=5081627 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_255_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14295..14933
DNA (639bp) protein (213aa)
Transcriptional regulator id=1278948 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
TetR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
TetR family transcriptional regulator
bjp_ig2157_scaffold_255_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15148..15570)
DNA (423bp) protein (141aa)
UspA domain-containing protein id=5081629 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
uspa domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
UspA domain-containing protein
bjp_ig2157_scaffold_255_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15605..16492)
DNA (888bp) protein (296aa)
metallophosphoesterase id=5081630 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
metallophosphoesterase Tax=GWE1_Burkholderiales_65_30_curated
metallophosphoesterase
bjp_ig2157_scaffold_255_16
unknown

Not on your lists

comp(16527..16646)
DNA (120bp) protein (40aa)

This feature has no annotations

bjp_ig2157_scaffold_255_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16688..17653)
DNA (966bp) protein (322aa)
LysR family transcriptional regulator id=5081632 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_255_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17756..18307
DNA (552bp) protein (184aa)
hypothetical protein id=5081633 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_255_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18449..20320)
DNA (1872bp) protein (624aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32) Tax=GWE1_Burkholderiales_65_30_curated
phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] id=1278942 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_255_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20706..20849)
DNA (144bp) protein (48aa)
hypothetical protein id=5081635 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_255_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21111..21554)
DNA (444bp) protein (148aa)
h16_A3722; hypothetical protein id=5081636 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
h16_A3722; hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_255_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21563..23029)
DNA (1467bp) protein (489aa)
TM helix protein id=5081637 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacillus flagellatus genus=Methylobacillus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TM helix protein Tax=GWE1_Burkholderiales_65_30_curated
TM helix protein
bjp_ig2157_scaffold_255_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23226..24488)
DNA (1263bp) protein (421aa)
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] id=5081638 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] Tax=GWE1_Burkholderiales_65_30_curated
threonine dehydratase (EC:4.3.1.19)
bjp_ig2157_scaffold_255_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24596..27007
DNA (2412bp) protein (804aa)
ATPase id=5081639 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ATPase Tax=GWE1_Burkholderiales_65_30_curated
ATPase
bjp_ig2157_scaffold_255_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27004..27753)
DNA (750bp) protein (250aa)
glutamine amidotransferase class-i; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=5081640 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glutamine amidotransferase class-i; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=GWE1_Burkholderiales_65_30_curated
glutamine amidotransferase class-i
bjp_ig2157_scaffold_255_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27974..28318)
DNA (345bp) protein (115aa)
Uncharacterized protein id=5081641 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Uncharacterized protein Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_255_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28508..30409)
DNA (1902bp) protein (634aa)
recQ1; ATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=5081642 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
recQ1; ATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=GWE1_Burkholderiales_65_30_curated
recQ1; ATP-dependent DNA helicase
bjp_ig2157_scaffold_255_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30530..30949)
DNA (420bp) protein (140aa)
Rhodanese-like protein id=1278934 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rhodanese-like protein Tax=GWE1_Burkholderiales_65_30_curated
rhodanese-related sulfurtransferase
bjp_ig2157_scaffold_255_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31067..32086)
DNA (1020bp) protein (340aa)
hypothetical protein; K07119 id=5081644 bin=GWF1_Burkholderiales_GWF1_66_17 species=Sphingomonas sp. SKA58 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein; K07119 Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_255_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32311..33390
DNA (1080bp) protein (360aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWE1_Burkholderiales_65_30_curated
methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) id=1278932 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Displaying items 1-30 of 41 in total

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