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bjp_ig2157_scaffold_312

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_312_1
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..4511)
DNA (4509bp) protein (1503aa)
hemolysin-type calcium-binding region n=1 Tax=Pseudomonas mandelii RepID=UPI00029A7675 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHZ67998.1}; TaxID=1147786 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mande
hypothetical protein
bjp_ig2157_scaffold_312_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4827..6257)
DNA (1431bp) protein (477aa)
histidine kinase (EC:2.7.3.-) id=5081457 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histidine kinase (EC:2.7.3.-) Tax=GWE1_Burkholderiales_65_30_curated
histidine kinase
bjp_ig2157_scaffold_312_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6254..6964)
DNA (711bp) protein (237aa)
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5081456 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWE1_Burkholderiales_65_30_curated
two component transcriptional regulator
bjp_ig2157_scaffold_312_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7081..10671)
DNA (3591bp) protein (1197aa)
indolepyruvate ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=GWE1_Burkholderiales_65_30_curated
Indolepyruvate ferredoxin oxidoreductase subunits alpha and beta id=1283679 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
indolepyruvate ferredoxin oxidoreductase
bjp_ig2157_scaffold_312_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11027..11809
DNA (783bp) protein (261aa)
glycosyltransferase id=5081454 bin=GWF1_Burkholderiales_GWF1_66_17 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glycosyltransferase Tax=GWE1_Burkholderiales_65_30_curated
Glycosyltransferase sugar-binding region containing DXD motif
bjp_ig2157_scaffold_312_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11817..13079
DNA (1263bp) protein (421aa)
family 2 glycosyl transferase id=5081453 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
family 2 glycosyl transferase Tax=GWE1_Burkholderiales_65_30_curated
glycosyl transferase, family 2
bjp_ig2157_scaffold_312_7
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13188..13697
DNA (510bp) protein (170aa)
Transcriptional regulator, AsnC family id=1283682 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Leucine-responsive regulatory protein {ECO:0000313|EMBL:EWS63309.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hyd
AsnC family transcriptional regulator
bjp_ig2157_scaffold_312_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13895..14458
DNA (564bp) protein (188aa)
Uncharacterized protein id=5081451 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Uncharacterized protein Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_312_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14615..15241
DNA (627bp) protein (209aa)
hypothetical protein id=5081450 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_312_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15238..15708
DNA (471bp) protein (157aa)
hypothetical protein id=5081449 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_312_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15705..16511
DNA (807bp) protein (269aa)
hypothetical protein id=5081448 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PL2G6 genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_312_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16508..18583
DNA (2076bp) protein (692aa)
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein id=5081447 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
bjp_ig2157_scaffold_312_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18650..19135
DNA (486bp) protein (162aa)
id=5081446 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
id=5081446 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_312_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19515..21092
DNA (1578bp) protein (526aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6); K00996 undecaprenyl-phosphate galactose phosphotransferase [EC:2.7.8.6] id=5081445 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6); K00996 undecaprenyl-phosphate galactose phosphotransferase [EC:2.7.8.6] Tax=GWE1_Burkholderiales_65_30_curated
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
bjp_ig2157_scaffold_312_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21169..22626
DNA (1458bp) protein (486aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] id=5081444 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] Tax=GWE1_Burkholderiales_65_
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
bjp_ig2157_scaffold_312_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22623..23600
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase id=1283692 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
NAD-dependent epimerase/dehydratase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_312_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23597..24745
DNA (1149bp) protein (383aa)
GDP-mannose 4,6-dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT66_9BURK
GDP-mannose 4,6-dehydratase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_312_18
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24784..26070
DNA (1287bp) protein (429aa)
Polysaccharide biosynthesis protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQ43_METSB rbh
polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACK51533.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyloce
bjp_ig2157_scaffold_312_19
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26133..27353
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000371E145 rbh
Glycosyltransferase rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EHP42574.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupria
bjp_ig2157_scaffold_312_20
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27358..28686
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHI9_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP63238.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
bjp_ig2157_scaffold_312_21
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28683..29849
DNA (1167bp) protein (389aa)
Glycosyl transferase group 1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLZ7_9BURK rbh
Glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:CEN56246.1}; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium
bjp_ig2157_scaffold_312_22
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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29846..30994
DNA (1149bp) protein (383aa)
Glycosyl transferase, group 1 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VS53_POLNA rbh
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABM38481.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas nap
bjp_ig2157_scaffold_312_23
GWD2_OD1_43_18, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

31131..32114
DNA (984bp) protein (328aa)
glycosyl transferase family protein
Glycosyl transferase, group 1 {ECO:0000313|EMBL:KKT05243.1}; TaxID=1619051 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWD2_43_18.;"
bjp_ig2157_scaffold_312_24
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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32111..32671
DNA (561bp) protein (187aa)
Putative acetyltransferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VS52_POLNA
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:ABM38480.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphth
bjp_ig2157_scaffold_312_25
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32661..33605
DNA (945bp) protein (315aa)
Lipopolysaccharide core biosynthesis glycosyl transferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT76_9BURK
Transferase 2, rSAM/selenodomain-associated {ECO:0000313|EMBL:EWS66200.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sourc
lipopolysaccharide core biosynthesis glycosyl transferase
bjp_ig2157_scaffold_312_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33602..34843
DNA (1242bp) protein (414aa)
glycosyl transferase; K03208 colanic acid biosynthesis glycosyl transferase WcaI id=5081435 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glycosyl transferase, group 1 Tax=GWE1_Burkholderiales_65_30_curated
glycosyl transferase
bjp_ig2157_scaffold_312_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34840..35691
DNA (852bp) protein (284aa)
NUDIX hydrolase; K03207 colanic acid biosynthesis protein WcaH [EC:3.6.1.-] id=5081434 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NUDIX hydrolase; K03207 colanic acid biosynthesis protein WcaH [EC:3.6.1.-] Tax=GWE1_Burkholderiales_65_30_curated
NUDIX hydrolase
bjp_ig2157_scaffold_312_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35688..36497
DNA (810bp) protein (270aa)
putative-binding-protein-dependent transport system protein id=5081433 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Lipid A core--O-antigen ligase-like protein Tax=GWE1_Burkholderiales_65_30_curated
Displaying 28 items

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