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bjp_ig2157_scaffold_331

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_331_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..358)
DNA (357bp) protein (119aa)
membrane protein id=5081728 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_331_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362..1330)
DNA (969bp) protein (323aa)
L-asparaginase; K01424 L-asparaginase [EC:3.5.1.1] id=5081729 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
L-asparaginase; K01424 L-asparaginase [EC:3.5.1.1] Tax=GWE1_Burkholderiales_65_30_curated
L-asparaginase
bjp_ig2157_scaffold_331_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1469..2155
DNA (687bp) protein (229aa)
lexA; transcriptional regulator LexA; K01356 repressor LexA [EC:3.4.21.88] Tax=GWE1_Burkholderiales_65_30_curated
LexA repressor id=1279235 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
lexA; transcriptional regulator LexA
bjp_ig2157_scaffold_331_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2292..2672
DNA (381bp) protein (127aa)
id=5081731 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5081731 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_331_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2755..3762
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] id=5081732 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWE1_Burkholderiales_65_30_curated
D-isomer specific 2-hydroxyacid dehydrogenase
bjp_ig2157_scaffold_331_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3839..5323)
DNA (1485bp) protein (495aa)
hypothetical protein id=5081733 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_331_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5994..7514
DNA (1521bp) protein (507aa)
3-hydroxy-acyl-CoA dehydrogenase (EC:1.1.1.35); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=5081734 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157) Tax=GWE1_Burkholderiales_65_30_curated
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
bjp_ig2157_scaffold_331_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7548..8327
DNA (780bp) protein (260aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=GWE1_Burkholderiales_65_30_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase id=1279240 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_331_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8467..9186
DNA (720bp) protein (240aa)
Crp/FNR family transcriptional regulator id=5081736 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Crp/FNR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
Crp/FNR family transcriptional regulator
bjp_ig2157_scaffold_331_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9266..10351
DNA (1086bp) protein (362aa)
aminoglycoside phosphotransferase; K06979 id=5081737 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
aminoglycoside phosphotransferase; K06979 Tax=GWE1_Burkholderiales_65_30_curated
aminoglycoside phosphotransferase
bjp_ig2157_scaffold_331_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10412..11671
DNA (1260bp) protein (420aa)
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] id=5081738 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=GWE1_Burkholderiales_65_30_curated
acyl-CoA dehydrogenase domain-containing protein
bjp_ig2157_scaffold_331_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11689..12354)
DNA (666bp) protein (222aa)
hypothetical protein id=5081739 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_331_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12418..13122
DNA (705bp) protein (235aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=GWE1_Burkholderiales_65_30_curated
Glutathione S-transferase id=1279245 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glutathione S-transferase
bjp_ig2157_scaffold_331_trna_1
unknown

Not on your lists

13180..13253
DNA (74bp)
transferRNA
bjp_ig2157_scaffold_331_trna_2
unknown

Not on your lists

13320..13393
DNA (74bp)
transferRNA
bjp_ig2157_scaffold_331_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13537..14724)
DNA (1188bp) protein (396aa)
Extracellular ligand-binding receptor id=1279246 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
extracellular ligand-binding receptor
bjp_ig2157_scaffold_331_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..15357)
DNA (444bp) protein (148aa)
DNA polymerase III chi subunit, HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] id=5081742 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
DNA polymerase III chi subunit, HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] Tax=GWE1_Burkholderiales_65_30_curated
DNA polymerase III chi subunit, HolC
bjp_ig2157_scaffold_331_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15411..16922)
DNA (1512bp) protein (504aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=5081743 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
PepA aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=GWE1_Burkholderiales_65_30_curated
leucyl aminopeptidase
bjp_ig2157_scaffold_331_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16950..18089
DNA (1140bp) protein (380aa)
permease; K07091 lipopolysaccharide export system permease protein id=5081744 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
permease; K07091 lipopolysaccharide export system permease protein Tax=GWE1_Burkholderiales_65_30_curated
permease
bjp_ig2157_scaffold_331_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18086..19204
DNA (1119bp) protein (373aa)
Permease YjgP/YjgQ id=1279250 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein Tax=GWE1_Burkholderiales_65_30_curated
permease YjgP/YjgQ
bjp_ig2157_scaffold_331_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19209..19574
DNA (366bp) protein (122aa)
sirohydrochlorin cobaltochelatase-like id=5081746 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cobalamin (vitamin B12) biosynthesis CbiX protein Tax=GWE1_Burkholderiales_65_30_curated
cobalamin (vitamin B12) biosynthesis CbiX protein
bjp_ig2157_scaffold_331_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19571..20515
DNA (945bp) protein (315aa)
Transcriptional regulator CysB-like protein id=1279252 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator Tax=GWE1_Burkholderiales_65_30_curated
transcriptional regulator CysB-like protein
bjp_ig2157_scaffold_331_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20667..21839
DNA (1173bp) protein (391aa)
similar to aspartate aminotransferase id=5081748 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
similar to aspartate aminotransferase Tax=GWE1_Burkholderiales_65_30_curated
methionine aminotransferase
bjp_ig2157_scaffold_331_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21876..22592)
DNA (717bp) protein (239aa)
Rieske-I iron sulfur protein id=1279254 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Rieske-I iron sulfur protein Tax=GWE1_Burkholderiales_65_30_curated
Rieske-I iron sulfur protein
bjp_ig2157_scaffold_331_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22706..26599)
DNA (3894bp) protein (1298aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] id=5081750 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] Tax=GWE1_Burkholderiales_65_30_curated
ATP-dependent helicase HrpA
bjp_ig2157_scaffold_331_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26674..28026
DNA (1353bp) protein (451aa)
N-acetylglutamate synthase (EC:2.3.1.1); K14682 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=GWE1_Burkholderiales_65_30_curated
N-acetylglutamate synthase (EC:2.3.1.1)
Amino-acid acetyltransferase id=1279256 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_331_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28119..29396
DNA (1278bp) protein (426aa)
polyphosphate kinase 2, PA0141 family id=5081752 bin=GWF1_Burkholderiales_GWF1_66_17 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
polyphosphate kinase 2, PA0141 family Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_331_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29465..29983)
DNA (519bp) protein (173aa)
Disulfide bond formation protein B id=1279258 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=GWE1_Burkholderiales_65_30_curated
disulfide bond formation protein DsbB
bjp_ig2157_scaffold_331_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30060..30833)
DNA (774bp) protein (258aa)
Ferredoxin--NADP(+) reductase id=1279259 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ferredoxin--NADP(+) reductase Tax=GWE1_Burkholderiales_65_30_curated
ferredoxin--NADP(+) reductase
bjp_ig2157_scaffold_331_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31170..31448
DNA (279bp) protein (93aa)
hypothetical protein id=5081755 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 33 in total

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