ggKbase home page

bjp_ig2157_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_364_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18..365
DNA (348bp) protein (116aa)
UPF0145 protein Q5W_4609 id=1274235 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_364_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

376..828
DNA (453bp) protein (151aa)
Putative uncharacterized protein id=5079333 bin=GWF1_Burkholderiales_GWF1_66_17 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Putative uncharacterized protein Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_364_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(845..1255)
DNA (411bp) protein (137aa)
id=5079334 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5079334 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_364_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1323..2513)
DNA (1191bp) protein (397aa)
lytic murein transglycosylase family protein id=5079335 bin=GWF1_Burkholderiales_GWF1_66_17 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
lytic murein transglycosylase family protein Tax=GWE1_Burkholderiales_65_30_curated
lytic murein transglycosylase family protein
bjp_ig2157_scaffold_364_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2518..3891)
DNA (1374bp) protein (458aa)
beta-lactamase-like protein; K07576 metallo-beta-lactamase family protein id=5079336 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
predicted exonuclease of the beta-lactamase fold involved in RNA processing
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_364_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4042..4743
DNA (702bp) protein (234aa)
haloacid dehalogenase (EC:3.8.1.2); K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=GWE1_Burkholderiales_65_30_curated
haloacid dehalogenase (EC:3.8.1.2)
2-haloalkanoic acid dehalogenase, type II id=1261896 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_364_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4899..5933)
DNA (1035bp) protein (345aa)
hypothetical protein; K07238 zinc transporter, ZIP family id=5079338 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein; K07238 zinc transporter, ZIP family Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_364_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6058..6258)
DNA (201bp) protein (67aa)
Uncharacterized protein id=5079339 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Uncharacterized protein Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_364_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6537..7004
DNA (468bp) protein (156aa)
rhodanese domain-containing protein id=5079340 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
rhodanese domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
rhodanese domain-containing protein
bjp_ig2157_scaffold_364_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7031..8674)
DNA (1644bp) protein (548aa)
gamma-glutamyltransferase (EC:2.3.2.2) Tax=GWE1_Burkholderiales_65_30_curated
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase id=1261900 bin=GWE1_Burkholderiales_65_30 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_364_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8696..9319)
DNA (624bp) protein (208aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] id=5079342 bin=GWF1_Burkholderiales_GWF1_66_17 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=GWE1_Burkholderiales_65_30_curated
glutathione S-transferase
bjp_ig2157_scaffold_364_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9395..9562
DNA (168bp) protein (56aa)
id=5079343 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5079343 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_364_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9573..10721)
DNA (1149bp) protein (383aa)
fad dependent oxidoreductase id=5079344 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
fad dependent oxidoreductase Tax=GWE1_Burkholderiales_65_30_curated
fad dependent oxidoreductase
bjp_ig2157_scaffold_364_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10760..11773)
DNA (1014bp) protein (338aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] id=5079345 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=GWE1_Burkholderiales_65_30_curated
adenosine deaminase (EC:3.5.4.4)
bjp_ig2157_scaffold_364_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12013..12441
DNA (429bp) protein (143aa)
hypothetical protein id=5079346 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_364_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12537..13661)
DNA (1125bp) protein (375aa)
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ id=5079347 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=GWE1_Burkholderiales_65_30_curated
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain
bjp_ig2157_scaffold_364_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13746..15683)
DNA (1938bp) protein (646aa)
chaperone protein dnak; K04043 molecular chaperone DnaK id=5079348 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
dnaK; molecular chaperone DnaK Tax=GWE1_Burkholderiales_65_30_curated
dnaK; molecular chaperone DnaK
bjp_ig2157_scaffold_364_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15803..16357)
DNA (555bp) protein (185aa)
Protein GrpE id=1261908 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
heat shock protein GrpE Tax=GWE1_Burkholderiales_65_30_curated
heat shock protein GrpE
bjp_ig2157_scaffold_364_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16498..17352
DNA (855bp) protein (285aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) id=5079350 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) Tax=GWE1_Burkholderiales_65_30_curated
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
bjp_ig2157_scaffold_364_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17445..17765)
DNA (321bp) protein (107aa)
putative transcriptional regulator id=5079351 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
putative transcriptional regulator
bjp_ig2157_scaffold_364_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17911..18444)
DNA (534bp) protein (178aa)
MarR family transcriptional regulator id=5079352 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
MarR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
MarR family transcriptional regulator
bjp_ig2157_scaffold_364_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18490..20202)
DNA (1713bp) protein (571aa)
acyl-CoA dehydrogenase-like protein Tax=GWE1_Burkholderiales_65_30_curated
acyl-CoA dehydrogenase-like protein id=5079353 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyl-CoA dehydrogenase-like protein
bjp_ig2157_scaffold_364_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20226..21950)
DNA (1725bp) protein (575aa)
tannase and feruloyl esterase; K09252 feruloyl esterase [EC:3.1.1.73] Tax=GWE1_Burkholderiales_65_30_curated
Tannase and feruloyl esterase id=1261913 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
tannase and feruloyl esterase
bjp_ig2157_scaffold_364_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21964..22959)
DNA (996bp) protein (332aa)
Twin-arginine translocation pathway signal id=1261914 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
twin-arginine translocation pathway signal protein Tax=GWE1_Burkholderiales_65_30_curated
twin-arginine translocation pathway signal protein
bjp_ig2157_scaffold_364_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23025..23444)
DNA (420bp) protein (140aa)
4-hydroxybenzoyl-CoA thioesterase (EC:3.1.2.23); K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] Tax=GWE1_Burkholderiales_65_30_curated
4-hydroxybenzoyl-CoA thioesterase (EC:3.1.2.23)
4-hydroxybenzoyl-CoA thioesterase id=1261915 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_364_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23561..24325)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR id=1261916 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
short-chain dehydrogenase/reductase SDR Tax=GWE1_Burkholderiales_65_30_curated
short-chain dehydrogenase/reductase SDR
bjp_ig2157_scaffold_364_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24327..25577)
DNA (1251bp) protein (417aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWE1_Burkholderiales_65_30_curated
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase id=1261917 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_364_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25591..27447)
DNA (1857bp) protein (619aa)
feruloyl-CoA synthase; K12508 feruloyl-CoA synthase [EC:6.2.1.34] Tax=GWE1_Burkholderiales_65_30_curated
feruloyl-CoA synthase; K12508 feruloyl-CoA synthase [EC:6.2.1.34] id=5079359 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
feruloyl-CoA synthase
bjp_ig2157_scaffold_364_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27602..28393)
DNA (792bp) protein (264aa)
enoyl-CoA hydratase (EC:4.2.1.17) id=5079360 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
enoyl-CoA hydratase (EC:4.2.1.17) Tax=GWE1_Burkholderiales_65_30_curated
enoyl-CoA hydratase (EC:4.2.1.17)
bjp_ig2157_scaffold_364_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28507..29370
DNA (864bp) protein (288aa)
Amidohydrolase 2 id=1261920 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; K07045 Tax=GWE1_Burkholderiales_65_30_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Displaying items 1-30 of 32 in total

View Taxonomy