ggKbase home page

bjp_ig2157_scaffold_384

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_384_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Beta-lactamase domain protein id=1270719 bin=GWE1_Burkholderiales_65_30 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_384_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131..376)
DNA (246bp) protein (82aa)
hypothetical protein id=5080625 bin=GWF1_Burkholderiales_GWF1_66_17 species=gamma proteobacterium BDW918 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_384_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

657..1775
DNA (1119bp) protein (373aa)
twin-arginine translocation pathway signal protein id=5080626 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative TRAP dicarboxylate transporter, subunit DctP Tax=GWE1_Burkholderiales_65_30_curated
putative TRAP dicarboxylate transporter, subunit DctP
bjp_ig2157_scaffold_384_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1836..2456
DNA (621bp) protein (207aa)
Uncharacterized protein id=1270722 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_384_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2453..4471
DNA (2019bp) protein (673aa)
hypothetical protein id=5080628 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_384_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4637..5536
DNA (900bp) protein (300aa)
Uncharacterized protein id=1270724 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_384_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5838..9131
DNA (3294bp) protein (1098aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] id=5080630 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] Tax=GWE1_Burkholderiales_65_30_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
bjp_ig2157_scaffold_384_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9241..12666
DNA (3426bp) protein (1142aa)
multi-sensor signal transduction histidine kinase id=5080631 bin=GWF1_Burkholderiales_GWF1_66_17 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
multi-sensor signal transduction histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
multi-sensor signal transduction histidine kinase
bjp_ig2157_scaffold_384_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12875..13198
DNA (324bp) protein (108aa)
Sulfide dehydrogenase, cytochrome subunit id=5080632 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sulfide dehydrogenase, cytochrome subunit Tax=GWE1_Burkholderiales_65_30_curated
sulfide dehydrogenase, cytochrome subunit
bjp_ig2157_scaffold_384_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13209..14501
DNA (1293bp) protein (431aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=1270728 bin=GWE1_Burkholderiales_65_30 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=GWE1_Burkholderiales_65_30_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
bjp_ig2157_scaffold_384_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14590..15507
DNA (918bp) protein (306aa)
arginase (EC:3.5.3.1); K01476 arginase [EC:3.5.3.1] id=5080634 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
arginase (EC:3.5.3.1); K01476 arginase [EC:3.5.3.1] Tax=GWE1_Burkholderiales_65_30_curated
arginase (EC:3.5.3.1)
bjp_ig2157_scaffold_384_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15625..15924)
DNA (300bp) protein (100aa)
antibiotic biosynthesis monooxygenase; K07145 id=5080635 bin=GWF1_Burkholderiales_GWF1_66_17 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Antibiotic biosynthesis monooxygenase Tax=GWE1_Burkholderiales_65_30_curated
Antibiotic biosynthesis monooxygenase
bjp_ig2157_scaffold_384_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15921..17558)
DNA (1638bp) protein (546aa)
choline dehydrogenase Tax=GWE1_Burkholderiales_65_30_curated
Choline dehydrogenase id=1270731 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
choline dehydrogenase
bjp_ig2157_scaffold_384_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17793..18644
DNA (852bp) protein (284aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWE1_Burkholderiales_65_30_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase id=1270732 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_384_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18842..19381
DNA (540bp) protein (180aa)
hypothetical protein id=5080638 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_384_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19493..20896
DNA (1404bp) protein (468aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] id=5080639 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] Tax=GWE1_Burkholderiales_65_30_curated
pyridine nucleotide-disulfide oxidoreductase dimerisation region
bjp_ig2157_scaffold_384_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20935..22212)
DNA (1278bp) protein (426aa)
hypothetical protein id=5080640 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_384_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22264..23751
DNA (1488bp) protein (496aa)
AMP nucleosidase (EC:3.2.2.4); K01241 AMP nucleosidase [EC:3.2.2.4] Tax=GWE1_Burkholderiales_65_30_curated
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase id=1270736 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_384_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23761..24879
DNA (1119bp) protein (373aa)
small-conductance mechanosensitive channel protein; K16052 MscS family membrane protein YnaI id=5080642 bin=GWF1_Burkholderiales_GWF1_66_17 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
small-conductance mechanosensitive channel protein Tax=GWE1_Burkholderiales_65_30_curated
small-conductance mechanosensitive channel protein
bjp_ig2157_scaffold_384_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25020..26486
DNA (1467bp) protein (489aa)
RND efflux system outer membrane lipoprotein id=5080643 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
RND efflux system outer membrane lipoprotein Tax=GWE1_Burkholderiales_65_30_curated
RND efflux system outer membrane lipoprotein
bjp_ig2157_scaffold_384_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26513..27814
DNA (1302bp) protein (434aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=5080644 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=GWE1_Burkholderiales_65_30_curated
RND family efflux transporter MFP subunit
bjp_ig2157_scaffold_384_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27811..28599
DNA (789bp) protein (263aa)
ABC-type antimicrobial peptide transport system, ATPase component id=1270740 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC transporter-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_384_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28589..29401
DNA (813bp) protein (271aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=5080646 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
Displaying 23 items

View Taxonomy