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bjp_ig2157_scaffold_530

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_530_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1917)
DNA (1917bp) protein (639aa)
nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4] Tax=GWE1_Burkholderiales_65_30_curated
respiratory nitrate reductase subunit alpha apoprotein (EC:1.7.99.4)
Nitrate reductase subunit alpha id=1287785 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_530_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1961..3619)
DNA (1659bp) protein (553aa)
Nitrate/nitrite antiporter id=1287784 bin=GWE1_Burkholderiales_65_30 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
nitrate/nitrite antiporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter Tax=GWE1_Burkholderiales_65_30_curated
nitrate/nitrite antiporter
bjp_ig2157_scaffold_530_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..4912)
DNA (1269bp) protein (423aa)
major facilitator superfamily transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter id=5082981 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
major facilitator superfamily transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter Tax=GWE1_Burkholderiales_65_30_curated
major facilitator superfamily transporter
bjp_ig2157_scaffold_530_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5083..5769)
DNA (687bp) protein (229aa)
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL id=5082982 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL Tax=GWE1_Burkholderiales_65_30_curated
two component LuxR family transcriptional regulator
bjp_ig2157_scaffold_530_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..7697)
DNA (1932bp) protein (644aa)
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] id=5082983 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] Tax=GWE1_Burkhol
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ (EC:2.7.3.-)
bjp_ig2157_scaffold_530_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7846..9270
DNA (1425bp) protein (475aa)
cytochrome c oxidase accessory protein CcoG id=5082984 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome c oxidase accessory protein CcoG Tax=GWE1_Burkholderiales_65_30_curated
cytochrome c oxidase accessory protein CcoG
bjp_ig2157_scaffold_530_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9337..9774)
DNA (438bp) protein (146aa)
hypothetical protein id=5082985 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
dehydrogenase Tax=GWE1_Burkholderiales_65_30_curated
dehydrogenase
bjp_ig2157_scaffold_530_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9930..10403)
DNA (474bp) protein (158aa)
transcriptional regulator, rrf2 family; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor id=5082986 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
transcriptional regulator, rrf2 family; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor Tax=GWE1_Burkholderiales_65_30_curated
BadM/Rrf2 family transcriptional regulator
bjp_ig2157_scaffold_530_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10530..11252
DNA (723bp) protein (241aa)
hemerythrin hhe cation-binding domain-containing protein; K07322 regulator of cell morphogenesis and NO signaling id=5082987 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hemerythrin hhe cation-binding domain-containing protein; K07322 regulator of cell morphogenesis and NO signaling Tax=GWE1_Burkholderiales_65_30_curated
hemerythrin hhe cation-binding domain-containing protein
bjp_ig2157_scaffold_530_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11387..12421
DNA (1035bp) protein (345aa)
Peptidase U32 id=1287776 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
peptidase U32 Tax=GWE1_Burkholderiales_65_30_curated
peptidase U32
bjp_ig2157_scaffold_530_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12626..13525
DNA (900bp) protein (300aa)
peptidase U32; K01423 [EC:3.4.-.-] id=5082989 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptidase U32; K01423 [EC:3.4.-.-] Tax=GWE1_Burkholderiales_65_30_curated
collagenase and related protease
bjp_ig2157_scaffold_530_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13534..14052
DNA (519bp) protein (173aa)
sterol-binding domain protein id=5082990 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sterol-binding domain protein Tax=GWE1_Burkholderiales_65_30_curated
putative lipid carrier protein
bjp_ig2157_scaffold_530_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14049..14483
DNA (435bp) protein (145aa)
hypothetical protein id=5082991 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
uncharacterized conserved protein
bjp_ig2157_scaffold_530_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14476..15075
DNA (600bp) protein (200aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=1287772 bin=GWE1_Burkholderiales_65_30 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=GWE1_Burkholderiales_65_30_curated
3-polyprenyl-4-hydroxybenzoate decarboxylase
bjp_ig2157_scaffold_530_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15072..16556
DNA (1485bp) protein (495aa)
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] id=5082993 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=GWE1_Burkholderiales_65_30_curated
3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase
bjp_ig2157_scaffold_530_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16581..17282)
DNA (702bp) protein (234aa)
CarD family transcriptional regulator id=5082994 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
CarD family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
CarD family transcriptional regulator
bjp_ig2157_scaffold_530_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17468..17905
DNA (438bp) protein (146aa)
Putative nitric-oxide reductase subunit C id=1287769 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
putative nitric-oxide reductase subunit C; K02305 nitric oxide reductase subunit C Tax=GWE1_Burkholderiales_65_30_curated
putative nitric-oxide reductase subunit C
bjp_ig2157_scaffold_530_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17944..19371
DNA (1428bp) protein (476aa)
cytochrome c oxidase subunit I; K04561 nitric oxide reductase subunit B [EC:1.7.2.5] Tax=GWE1_Burkholderiales_65_30_curated
Cytochrome c oxidase subunit I id=1287768 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
cytochrome c oxidase subunit I
bjp_ig2157_scaffold_530_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19388..20203
DNA (816bp) protein (272aa)
ATPase; K04748 nitric oxide reductase NorQ protein id=5082997 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ATPase; K04748 nitric oxide reductase NorQ protein Tax=GWE1_Burkholderiales_65_30_curated
ATPase
bjp_ig2157_scaffold_530_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20231..21265
DNA (1035bp) protein (345aa)
iron-sulfur cluster-binding protein id=5082998 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
iron-sulfur cluster-binding protein Tax=GWE1_Burkholderiales_65_30_curated
iron-sulfur cluster-binding protein
bjp_ig2157_scaffold_530_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21265..21837
DNA (573bp) protein (191aa)
von Willebrand factor type A; K02448 nitric oxide reductase NorD protein id=5082999 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
von Willebrand factor type A; K02448 nitric oxide reductase NorD protein Tax=GWE1_Burkholderiales_65_30_curated
norD; nitric oxide reductase activation protein NorD
Displaying 21 items

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