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bjp_ig2157_scaffold_621

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_621_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..152)
DNA (150bp) protein (50aa)
similar to dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) id=5082658 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sucB; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase E2 component, and related enzymes
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_621_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236..3127)
DNA (2892bp) protein (964aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2) Tax=GWE1_Burkholderiales_65_30_curated
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component id=1269772 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_621_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3378..3752)
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=5082656 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ArsR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_621_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3925..5826)
DNA (1902bp) protein (634aa)
prpE; propionyl-CoA synthetase; K01908 propionyl-CoA synthetase [EC:6.2.1.17] Tax=GWE1_Burkholderiales_65_30_curated
Propionate--CoA ligase id=1269774 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
prpE; propionyl-CoA synthetase
bjp_ig2157_scaffold_621_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6070..6675)
DNA (606bp) protein (202aa)
isochorismatase hydrolase id=5082654 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
isochorismatase hydrolase Tax=GWE1_Burkholderiales_65_30_curated
isochorismatase hydrolase
bjp_ig2157_scaffold_621_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6906..7433
DNA (528bp) protein (176aa)
peptidace C40 NLP/P60 id=5082653 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nlp/p60 protein Tax=GWE1_Burkholderiales_65_30_curated
nlp/p60 protein
bjp_ig2157_scaffold_621_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7513..8184)
DNA (672bp) protein (224aa)
cytochrome c, class I id=5082652 bin=GWF1_Burkholderiales_GWF1_66_17 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome c, class I Tax=GWE1_Burkholderiales_65_30_curated
soxE; cytochrome c553
bjp_ig2157_scaffold_621_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8418..9062)
DNA (645bp) protein (215aa)
type 11 methyltransferase id=5083008 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
type 11 methyltransferase Tax=GWE1_Burkholderiales_65_30_curated
type 11 methyltransferase
bjp_ig2157_scaffold_621_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9248..10531)
DNA (1284bp) protein (428aa)
aromatic hydrocarbon degradation membrane protein; K06076 long-chain fatty acid transport protein id=5083009 bin=GWF1_Burkholderiales_GWF1_66_17 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
aromatic hydrocarbon degradation membrane protein; K06076 long-chain fatty acid transport protein Tax=GWE1_Burkholderiales_65_30_curated
aromatic hydrocarbon degradation membrane protein
bjp_ig2157_scaffold_621_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10799..11575
DNA (777bp) protein (259aa)
transcriptional regulator id=5083010 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
transcriptional regulator
bjp_ig2157_scaffold_621_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11782..12576
DNA (795bp) protein (265aa)
Crp/FNR family transcriptional regulator id=5083011 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Crp/FNR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
Crp/FNR family transcriptional regulator
bjp_ig2157_scaffold_621_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12722..13168
DNA (447bp) protein (149aa)
hypothetical protein id=5083012 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
PRC-barrel domain protein Tax=GWE1_Burkholderiales_65_30_curated
photosystem reaction center subunit H
bjp_ig2157_scaffold_621_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13261..14001)
DNA (741bp) protein (247aa)
hypothetical protein id=5083013 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_621_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14131..14361)
DNA (231bp) protein (77aa)
id=5083014 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5083014 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_621_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14585..14815
DNA (231bp) protein (77aa)
hypothetical protein id=5083015 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_621_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14959..16797)
DNA (1839bp) protein (613aa)
dihydrolipoamide dehydrogenase Tax=GWE1_Burkholderiales_65_30_curated
Dihydrolipoamide dehydrogenase id=1266290 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
dihydrolipoamide dehydrogenase
bjp_ig2157_scaffold_621_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16807..18249)
DNA (1443bp) protein (481aa)
dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5083017 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=GWE1_Burkholderiales_65_30_curated
dihydrolipoamide acetyltransferase
bjp_ig2157_scaffold_621_18
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18470..18883)
DNA (414bp) protein (138aa)
Nucleoside diphosphate kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKS3_9RHOB
ndk; nucleoside diphosphate kinase
Tax=BJP_IG2158_Rhodobacterales_64_37
Displaying 18 items

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