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bjp_ig2157_scaffold_647

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_647_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1490)
DNA (1488bp) protein (496aa)
High-affinity choline transport protein id=1270958 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
high-affinity choline transport protein Tax=GWE1_Burkholderiales_65_30_curated
high-affinity choline transport protein
bjp_ig2157_scaffold_647_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2034..2315
DNA (282bp) protein (94aa)
hypothetical protein id=5080865 bin=GWF1_Burkholderiales_GWF1_66_17 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_647_3
unknown

Not on your lists

comp(2337..2453)
DNA (117bp) protein (39aa)

This feature has no annotations

bjp_ig2157_scaffold_647_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2426..3295)
DNA (870bp) protein (290aa)
hypothetical protein id=5080866 bin=GWF1_Burkholderiales_GWF1_66_17 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_647_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3282..3533)
DNA (252bp) protein (84aa)
Prevent-host-death family protein id=1270961 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
prevent-host-death family protein Tax=GWE1_Burkholderiales_65_30_curated
antitoxin of toxin-antitoxin stability system
bjp_ig2157_scaffold_647_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3732..4910
DNA (1179bp) protein (393aa)
general substrate transporters id=5080868 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
general substrate transporters Tax=GWE1_Burkholderiales_65_30_curated
general substrate transporters
bjp_ig2157_scaffold_647_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4915..5121)
DNA (207bp) protein (69aa)
helix-turn-helix protein, CopG id=5080869 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative ribbon-helix-helix protein, CobG family Tax=GWE1_Burkholderiales_65_30_curated
putative ribbon-helix-helix protein, CobG family
bjp_ig2157_scaffold_647_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5170..5520)
DNA (351bp) protein (117aa)
id=5080870 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5080870 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_647_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5608..5952
DNA (345bp) protein (115aa)
id=5080871 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5080871 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_647_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5949..6743
DNA (795bp) protein (265aa)
spermidine synthase-like protein id=5080872 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
spermidine synthase-like protein Tax=GWE1_Burkholderiales_65_30_curated
spermidine synthase-like protein
bjp_ig2157_scaffold_647_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6807..7145
DNA (339bp) protein (113aa)
alkylphosphonate utilization operon protein PhnA; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] Tax=GWE1_Burkholderiales_65_30_curated
Alkylphosphonate utilization operon protein PhnA id=1270967 bin=GWE1_Burkholderiales_65_30 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
alkylphosphonate utilization operon protein PhnA
bjp_ig2157_scaffold_647_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7216..8271)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein id=1270968 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_647_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8271..8621)
DNA (351bp) protein (117aa)
hypothetical protein id=5080875 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_647_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8672..9460)
DNA (789bp) protein (263aa)
hypothetical protein id=5080876 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_647_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9571..9954)
DNA (384bp) protein (128aa)
id=5080877 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5080877 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_647_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10094..10726
DNA (633bp) protein (211aa)
TetR family transcriptional regulator id=5080885 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TetR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
TetR family transcriptional regulator
bjp_ig2157_scaffold_647_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10723..11919
DNA (1197bp) protein (399aa)
RND family efflux transporter MFP subunit id=1270980 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
RND family efflux transporter MFP subunit Tax=GWE1_Burkholderiales_65_30_curated
RND family efflux transporter MFP subunit
bjp_ig2157_scaffold_647_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11916..13106
DNA (1191bp) protein (397aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=5080887 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_647_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13103..13846
DNA (744bp) protein (248aa)
ABC transporter-like protein id=1270982 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter-like protein
bjp_ig2157_scaffold_647_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13867..14862
DNA (996bp) protein (332aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] id=5080889 bin=GWF1_Burkholderiales_GWF1_66_17 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ornithine cyclodeaminase (EC:4.3.1.12)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_647_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14866..15369)
DNA (504bp) protein (168aa)
MarR family transcriptional regulator id=5080890 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
MarR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
MarR family transcriptional regulator
bjp_ig2157_scaffold_647_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15490..16458
DNA (969bp) protein (323aa)
tctC; extracytoplasmic binding receptor id=5080891 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
tctC; extracytoplasmic binding receptor Tax=GWE1_Burkholderiales_65_30_curated
tctC; extracytoplasmic binding receptor
bjp_ig2157_scaffold_647_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16467..17453
DNA (987bp) protein (329aa)
Extracytoplasmic binding receptor id=1270986 bin=GWE1_Burkholderiales_65_30 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
tctC; extracytoplasmic binding receptor Tax=GWE1_Burkholderiales_65_30_curated
putative exported protein
bjp_ig2157_scaffold_647_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17461..17742
DNA (282bp) protein (94aa)
sulfatase id=5080893 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sulfatase Tax=GWE1_Burkholderiales_65_30_curated
sulfatase
Displaying 24 items

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