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bjp_ig2157_scaffold_730

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_730_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157..492)
DNA (336bp) protein (112aa)
Branched-chain amino acid transport id=1283663 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
branched-chain amino acid transport Tax=GWE1_Burkholderiales_65_30_curated
predicted membrane protein
bjp_ig2157_scaffold_730_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(485..1228)
DNA (744bp) protein (248aa)
AzlC-like protein id=1283664 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
AzlC-like protein Tax=GWE1_Burkholderiales_65_30_curated
azlC; predicted branched-chain amino acid permease, azaleucine resistance
bjp_ig2157_scaffold_730_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1228..2223)
DNA (996bp) protein (332aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=GWE1_Burkholderiales_65_30_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase id=1283665 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_730_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2277..2777)
DNA (501bp) protein (167aa)
putative lipoprotein transmembrane id=5081468 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative lipoprotein transmembrane Tax=GWE1_Burkholderiales_65_30_curated
putative lipoprotein transmembrane
bjp_ig2157_scaffold_730_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2774..3295)
DNA (522bp) protein (174aa)
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=GWE1_Burkholderiales_65_30_curated
Peptide deformylase id=1283667 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
N-formylmethionyl-tRNA deformylase
bjp_ig2157_scaffold_730_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3561..4916
DNA (1356bp) protein (452aa)
peptidoglycan-binding LysM id=5081466 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptidoglycan-binding LysM Tax=GWE1_Burkholderiales_65_30_curated
peptidoglycan-binding lysm
bjp_ig2157_scaffold_730_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4923..6017
DNA (1095bp) protein (365aa)
DNA processing protein DprA; K04096 DNA processing protein id=5081465 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
DNA processing protein DprA; K04096 DNA processing protein Tax=GWE1_Burkholderiales_65_30_curated
DNA processing protein DprA
bjp_ig2157_scaffold_730_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6120..8372)
DNA (2253bp) protein (751aa)
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
Uncharacterized protein id=1283670 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
bjp_ig2157_scaffold_730_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8597..9553)
DNA (957bp) protein (319aa)
Protein translocase subunit SecF id=1283671 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
preprotein translocase subunit SecF
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_730_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9578..11458)
DNA (1881bp) protein (627aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD Tax=GWE1_Burkholderiales_65_30_curated
Protein translocase subunit SecD id=1283672 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
secD; preprotein translocase subunit SecD
bjp_ig2157_scaffold_730_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11588..11908)
DNA (321bp) protein (107aa)
Uncharacterized protein id=1283673 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K03210 preprotein translocase subunit YajC Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_730_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12102..12854
DNA (753bp) protein (251aa)
two-component response regulator transcription regulator protein id=5081460 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two-component response regulator transcription regulator protein Tax=GWE1_Burkholderiales_65_30_curated
bacterial regulatory s, luxR family protein
bjp_ig2157_scaffold_730_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12823..14040)
DNA (1218bp) protein (406aa)
two-component sensor histidine kinase transcription regulator protein (EC:2.7.3.-); K00936 [EC:2.7.3.-] id=5081459 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative PAS/PAC sensor protein Tax=GWE1_Burkholderiales_65_30_curated
putative PAS/PAC sensor protein
bjp_ig2157_scaffold_730_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14257..15906)
DNA (1650bp) protein (550aa)
heme peroxidase Tax=GWE1_Burkholderiales_65_30_curated
heme peroxidase id=5081458 bin=GWF1_Burkholderiales_GWF1_66_17 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Displaying 14 items

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