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bjp_ig2157_scaffold_839

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_839_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..582
DNA (582bp) protein (194aa)
amidohydrolase 2; K07046 id=5080157 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
amidohydrolase 2; K07046 Tax=GWE1_Burkholderiales_65_30_curated
amidohydrolase 2
bjp_ig2157_scaffold_839_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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602..1270
DNA (669bp) protein (223aa)
winged helix family two component transcriptional regulator; K07774 two-component system, OmpR family, response regulator TctD id=5080156 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two component transcriptional regulator, winged helix family Tax=GWE1_Burkholderiales_65_30_curated
two component transcriptional regulator, winged helix family
bjp_ig2157_scaffold_839_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1267..2694
DNA (1428bp) protein (476aa)
sensor histidine kinase TctE (EC:2.7.3.-); K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] id=5080155 bin=GWF1_Burkholderiales_GWF1_66_17 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sensor histidine kinase TctE (EC:2.7.3.-); K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] Tax=GWE1_Burkholderiales_65_30_curated
sensor histidine kinase TctE (EC:2.7.3.-)
bjp_ig2157_scaffold_839_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2802..3791
DNA (990bp) protein (330aa)
extra-cytoplasmic solute receptor family protein 181 id=5080154 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
extra-cytoplasmic solute receptor family protein 181 Tax=GWE1_Burkholderiales_65_30_curated
extra-cytoplasmic solute receptor family protein 181
bjp_ig2157_scaffold_839_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3871..4317
DNA (447bp) protein (149aa)
hypothetical protein id=5080153 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_839_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4319..5830
DNA (1512bp) protein (504aa)
tctA; putative tricarboxylate transport protein TctA id=5080152 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
tctA; tricarboxylate transport protein TctA Tax=GWE1_Burkholderiales_65_30_curated
tricarboxylate transport protein TctA
bjp_ig2157_scaffold_839_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5932..7530)
DNA (1599bp) protein (533aa)
aminopeptidase Y (EC:3.4.11.15); K01264 aminopeptidase Y [EC:3.4.11.15] Tax=GWE1_Burkholderiales_65_30_curated
aminopeptidase Y (EC:3.4.11.15); K01264 aminopeptidase Y [EC:3.4.11.15] id=5080151 bin=GWF1_Burkholderiales_GWF1_66_17 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
aminopeptidase Y (EC:3.4.11.15)
bjp_ig2157_scaffold_839_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7778..8623)
DNA (846bp) protein (282aa)
hypothetical protein id=5080150 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NYN domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
NYN domain-containing protein
bjp_ig2157_scaffold_839_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8793..9689)
DNA (897bp) protein (299aa)
iciA; chromosome initiation inhibitor; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor id=5080148 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
iciA; chromosome initiation inhibitor; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor Tax=GWE1_Burkholderiales_65_30_curated
iciA; Chromosome initiation inhibitor (OriC replication inhibitor)
bjp_ig2157_scaffold_839_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9763..10413
DNA (651bp) protein (217aa)
Lysine efflux permease id=1262707 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
amino acid exporter; K06895 L-lysine exporter family protein LysE/ArgO Tax=GWE1_Burkholderiales_65_30_curated
Arginine exporter protein ArgO
bjp_ig2157_scaffold_839_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10423..11073
DNA (651bp) protein (217aa)
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator id=5080146 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
FMN-binding negative transcriptional regulator
bjp_ig2157_scaffold_839_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11151..11789
DNA (639bp) protein (213aa)
negative transcriptional regulator; K07734 transcriptional regulator id=5080145 bin=GWF1_Burkholderiales_GWF1_66_17 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
negative transcriptional regulator; K07734 transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_839_13
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11888..12913)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FRN5_SHESH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV35508.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis
bjp_ig2157_scaffold_839_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13256..14065)
DNA (810bp) protein (270aa)
mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] id=5080141 bin=GWF1_Burkholderiales_GWF1_66_17 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] Tax=GWE1_Burkholderiales_65_30_curated
mercuric reductase (EC:1.16.1.1)
Displaying 14 items

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