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bjp_ig2157_scaffold_996

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_996_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=GWE1_Burkholderiales_65_30_curated
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase id=1274543 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_996_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(475..852)
DNA (378bp) protein (126aa)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_996_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1026..1487)
DNA (462bp) protein (154aa)
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR id=5082867 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
biopolymer transport protein ExbD/TolR
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_996_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1543..2202)
DNA (660bp) protein (220aa)
tolQ; biopolymer transport protein; K03561 biopolymer transport protein ExbB id=5082868 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
tolQ; biopolymer transport protein; K03561 biopolymer transport protein ExbB Tax=GWE1_Burkholderiales_65_30_curated
tolQ; biopolymer transport protein
bjp_ig2157_scaffold_996_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2229..3050)
DNA (822bp) protein (274aa)
dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=5082869 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=GWE1_Burkholderiales_65_30_curated
dapB; dihydrodipicolinate reductase
bjp_ig2157_scaffold_996_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3047..3823)
DNA (777bp) protein (259aa)
smpa/omla domain-containing protein; K06186 small protein A id=5082870 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
SmpA/OmlA domain-containing protein; K06186 small protein A Tax=GWE1_Burkholderiales_65_30_curated
tmRNA-binding small protein A
bjp_ig2157_scaffold_996_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3840..4280
DNA (441bp) protein (147aa)
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator id=5082871 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=GWE1_Burkholderiales_65_30_curated
Fe2+/Zn2+ uptake regulation protein
bjp_ig2157_scaffold_996_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..5284)
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] id=5082872 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=GWE1_Burkholderiales_65_30_curated
HPr kinase/phosphorylase
bjp_ig2157_scaffold_996_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5281..5751)
DNA (471bp) protein (157aa)
Pts iia-like nitrogen-regulatory protein id=1274550 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
phosphotransferase system mannitol/fructose-specific IIA domain Ntr-type component
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_996_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5891..6220)
DNA (330bp) protein (110aa)
Sigma 54 modulation protein/30S ribosomal protein S30P id=1274551 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
sigma 54 modulation protein/30S ribosomal protein S30P
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_996_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6373..7626)
DNA (1254bp) protein (418aa)
major facilitator superfamily transporter id=5082875 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
major facilitator superfamily transporter Tax=GWE1_Burkholderiales_65_30_curated
major facilitator superfamily transporter
bjp_ig2157_scaffold_996_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7694..8962
DNA (1269bp) protein (423aa)
Patatin id=1274553 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
patatin; K07001 NTE family protein Tax=GWE1_Burkholderiales_65_30_curated
patatin
bjp_ig2157_scaffold_996_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9168..10154
DNA (987bp) protein (329aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter id=5082877 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Mg2+ and Co2+ transporters
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_996_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10314..11063)
DNA (750bp) protein (250aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9); K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9] id=5082878 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative MTA/SAH nucleosidase Tax=GWE1_Burkholderiales_65_30_curated
putative MTA/SAH nucleosidase
bjp_ig2157_scaffold_996_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11127..12038)
DNA (912bp) protein (304aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=5082879 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
AMP-dependent synthetase and ligase Tax=GWE1_Burkholderiales_65_30_curated
AMP-dependent synthetase and ligase
Displaying 15 items

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