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bjp_ig2157_scaffold_1272

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1272_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..782)
DNA (780bp) protein (260aa)
extracellular solute-binding protein id=5080042 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
extracellular solute-binding protein Tax=GWE1_Burkholderiales_65_30_curated
extracellular solute-binding protein
bjp_ig2157_scaffold_1272_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(829..1326)
DNA (498bp) protein (166aa)
Cytochrome c-type protein id=1262601 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
cytochrome c-type protein Tax=GWE1_Burkholderiales_65_30_curated
cytochrome c-type protein
bjp_ig2157_scaffold_1272_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1762..3816
DNA (2055bp) protein (685aa)
sigma-54 factor interaction domain-containing protein id=5080040 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
GAF modulated sigma54 specific transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
GAF modulated sigma54 specific transcriptional regulator
bjp_ig2157_scaffold_1272_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3831..4844)
DNA (1014bp) protein (338aa)
beta-lactamase domain-containing protein id=5080039 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
beta-lactamase domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
beta-lactamase domain-containing protein
bjp_ig2157_scaffold_1272_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4895..6013)
DNA (1119bp) protein (373aa)
Alpha/beta hydrolase fold protein id=1262598 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
alpha/beta hydrolase fold protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_1272_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6256..7173
DNA (918bp) protein (306aa)
pyrroloquinoline quinone biosynthesis protein PqqB; K06136 pyrroloquinoline quinone biosynthesis protein B id=5080037 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
pyrroloquinoline quinone biosynthesis protein PqqB; K06136 pyrroloquinoline quinone biosynthesis protein B Tax=GWE1_Burkholderiales_65_30_curated
pyrroloquinoline quinone biosynthesis protein PqqB rbh
bjp_ig2157_scaffold_1272_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7184..7915
DNA (732bp) protein (244aa)
pyrroloquinoline quinone biosynthesis protein PqqC; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=GWE1_Burkholderiales_65_30_curated
Pyrroloquinoline-quinone synthase id=1262596 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
pyrroloquinoline quinone biosynthesis protein PqqC rbh
bjp_ig2157_scaffold_1272_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7912..8178
DNA (267bp) protein (89aa)
coenzyme PQQ biosynthesis protein PqqD id=5080035 bin=GWF1_Burkholderiales_GWF1_66_17 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
coenzyme PQQ biosynthesis protein PqqD Tax=GWE1_Burkholderiales_65_30_curated
coenzyme PQQ biosynthesis protein PqqD
bjp_ig2157_scaffold_1272_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8162..9307
DNA (1146bp) protein (382aa)
pyrroloquinoline quinone biosynthesis protein PqqE; K06139 pyrroloquinoline quinone biosynthesis protein E id=5080034 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
pyrroloquinoline quinone biosynthesis protein PqqE; K06139 pyrroloquinoline quinone biosynthesis protein E Tax=GWE1_Burkholderiales_65_30_curated
pyrroloquinoline quinone biosynthesis protein PqqE
bjp_ig2157_scaffold_1272_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9304..9795
DNA (492bp) protein (164aa)
hypothetical protein id=5080033 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
Displaying 10 items

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