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bjp_ig2157_scaffold_1521

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1521_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..516)
DNA (516bp) protein (172aa)
protein-(glutamine-n5) methyltransferase, release factor-specific; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=5082094 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
HemK family modification methylase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_1521_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(513..1601)
DNA (1089bp) protein (363aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=5082095 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=GWE1_Burkholderiales_65_30_curated
prfA; peptide chain release factor 1
bjp_ig2157_scaffold_1521_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1692..2984)
DNA (1293bp) protein (431aa)
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=5082096 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=GWE1_Burkholderiales_65_30_curated
hemA; glutamyl-tRNA reductase
bjp_ig2157_scaffold_1521_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3024..3302
DNA (279bp) protein (93aa)
hypothetical protein id=5082097 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_1521_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3324..4112)
DNA (789bp) protein (263aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=GWE1_Burkholderiales_65_30_curated
Glycerophosphoryl diester phosphodiesterase id=1270320 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glycerophosphoryl diester phosphodiesterase
bjp_ig2157_scaffold_1521_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4109..5122)
DNA (1014bp) protein (338aa)
sugar ABC transporter ATP-binding protein; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20] id=5082099 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sugar ABC transporter ATP-binding protein; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20] Tax=GWE1_Burkholderiales_65_30_curated
sugar ABC transporter ATP-binding protein
bjp_ig2157_scaffold_1521_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5169..6020)
DNA (852bp) protein (284aa)
twin-arginine translocation pathway signal protein; K05815 sn-glycerol 3-phosphate transport system permease protein id=5082100 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
twin-arginine translocation pathway signal protein; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
twin-arginine translocation pathway signal protein
bjp_ig2157_scaffold_1521_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6020..6907)
DNA (888bp) protein (296aa)
binding-protein-dependent transport systems inner membrane component; K05814 sn-glycerol 3-phosphate transport system permease protein id=5082101 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
binding-protein-dependent transport systems inner membrane component; K05814 sn-glycerol 3-phosphate transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
binding-protein-dependent transport systems inner membrane component
bjp_ig2157_scaffold_1521_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7002..8318)
DNA (1317bp) protein (439aa)
sugar ABC transporter periplasmic protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein id=5082102 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sugar ABC transporter periplasmic protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
sugar ABC transporter periplasmic protein
Displaying 9 items

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