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08E140C01_10kDa_scaffold_602

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_602_1
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1649)
DNA (1647bp) protein (549aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IXK3_PSEPS
08E140C01_10kDa_scaffold_602_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1850..2284)
DNA (435bp) protein (145aa)
DNA polymerase III subunit chi n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U958_PSEME
Uncharacterized protein {ECO:0000313|EMBL:EZH79920.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
08E140C01_10kDa_scaffold_602_3
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2345..2764)
DNA (420bp) protein (140aa)
holC; DNA polymerase III, chi subunit (EC:2.7.7.7)
HolC protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IDI6_PSEPS
DNA polymerase III subunit chi {ECO:0000313|EMBL:KFJ92601.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
08E140C01_10kDa_scaffold_602_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2894..4381)
DNA (1488bp) protein (496aa)
pepA; leucyl aminopeptidase (EC:3.4.11.1) rbh
Probable cytosol aminopeptidase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SIE5_PSEME rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1390370 spec
08E140C01_10kDa_scaffold_602_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4525..5574
DNA (1050bp) protein (350aa)
permease n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E7F6DF rbh
Permease {ECO:0000313|EMBL:ERH51569.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
YjgP/YjgQ family permease rbh
08E140C01_10kDa_scaffold_602_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5567..6601
DNA (1035bp) protein (345aa)
Permease YjgP/YjgQ family protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DUU3_PSEMN rbh
YjgP/YjgQ family permease rbh
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:AEB59821.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
08E140C01_10kDa_scaffold_602_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6645..7142)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U953_PSEME rbh
RDD domain-containing protein {ECO:0000313|EMBL:KJU77469.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
RDD domain-containing protein rbh
08E140C01_10kDa_scaffold_602_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7311..7523)
DNA (213bp) protein (71aa)
Cold shock-like protein cspG Short=CPS-G n=2 Tax=Pseudomonas aeruginosa group RepID=I7IDI8_PSEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM41836.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
08E140C01_10kDa_scaffold_602_trna_1
unknown

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comp(7863..7944)
DNA (82bp)
transferRNA
08E140C01_10kDa_scaffold_602_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8161..8934
DNA (774bp) protein (258aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031B94C0 rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU77471.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Ps
amino acid ABC transporter substrate-binding protein rbh
08E140C01_10kDa_scaffold_602_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9886..11019
DNA (1134bp) protein (378aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XY52_PSEMY rbh
08E140C01_10kDa_scaffold_602_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11060..11389
DNA (330bp) protein (110aa)
Preprotein translocase subunit YajC n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U948_PSEME
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KJU77474.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovor
yajC; preprotein translocase subunit YajC
08E140C01_10kDa_scaffold_602_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11457..13325
DNA (1869bp) protein (623aa)
Protein translocase subunit SecD n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZ81_PSEME rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ol
preprotein translocase subunit SecD rbh
08E140C01_10kDa_scaffold_602_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13335..14252
DNA (918bp) protein (306aa)
preprotein translocase subunit SecF n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031C86C6 rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ol
secF; preprotein translocase rbh
08E140C01_10kDa_scaffold_602_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14370..14912
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JIB6_PSEPS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH79933.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein rbh
08E140C01_10kDa_scaffold_602_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14971..15786)
DNA (816bp) protein (272aa)
suhB; inositol-1-monophosphatase (EC:3.1.3.25) rbh
Inositol monophosphatase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U5H3_PSEME rbh
Inositol monophosphatase {ECO:0000313|EMBL:KJU77478.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoa
08E140C01_10kDa_scaffold_602_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15932..16711
DNA (780bp) protein (260aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
RNA methyltransferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002ECC34A rbh
RNA methyltransferase rbh
08E140C01_10kDa_scaffold_602_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16704..17483
DNA (780bp) protein (260aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZ75_PSEME rbh
Serine acetyltransferase {ECO:0000313|EMBL:EZH79936.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pse
08E140C01_10kDa_scaffold_602_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17620..18111
DNA (492bp) protein (164aa)
Transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SID0_PSEME rbh
Transcriptional regulator {ECO:0000313|EMBL:EZH79937.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
iscR; HTH-type transcriptional regulator iscR rbh
08E140C01_10kDa_scaffold_602_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18142..19356
DNA (1215bp) protein (405aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacte
cysteine desulfurase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003092CDF rbh
cysteine desulfurase rbh
08E140C01_10kDa_scaffold_602_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19429..19815
DNA (387bp) protein (129aa)
FeS cluster assembly scaffold IscU n=1 Tax=Pseudomonas mendocina RepID=UPI000371459A
Scaffolding protein {ECO:0000313|EMBL:EZH79939.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
scaffold protein
08E140C01_10kDa_scaffold_602_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19829..20152
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U940_PSEME
Iron-binding protein IscA {ECO:0000256|SAAS:SAAS00037071}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
iscA; putative iron-sulfur cluster insertion protein erpA
08E140C01_10kDa_scaffold_602_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20162..20683
DNA (522bp) protein (174aa)
Co-chaperone protein HscB homolog n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZ70_PSEME rbh
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
hscB; Co-chaperone protein hscB homolog rbh
08E140C01_10kDa_scaffold_602_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20729..22594
DNA (1866bp) protein (622aa)
hscA; Chaperone protein dnaK (EC:1.3.1.74) rbh
Chaperone protein HscA homolog n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SIC5_PSEME rbh
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
08E140C01_10kDa_scaffold_602_24
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22598..22939
DNA (342bp) protein (114aa)
2Fe-2S ferredoxin n=2 Tax=Pseudomonas aeruginosa group RepID=I7JIC1_PSEPS
fdx; 2Fe-2S ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:CDM41819.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalca
08E140C01_10kDa_scaffold_602_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22957..23157
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U5G5_PSEME
Uncharacterized protein {ECO:0000313|EMBL:KJU77488.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein
08E140C01_10kDa_scaffold_602_26
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23259..23690
DNA (432bp) protein (144aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K134_PSEPS
08E140C01_10kDa_scaffold_602_27
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23718..24866
DNA (1149bp) protein (383aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
rlmN; radical SAM protein (EC:2.1.1.-) rbh
50S rRNA methyltransferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E18957 rbh
08E140C01_10kDa_scaffold_602_28
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24880..25641
DNA (762bp) protein (254aa)
pilus assembly protein PilW n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DF92AD rbh
Pilus assembly protein PilW {ECO:0000313|EMBL:KFJ92644.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
pilF; type IV pilus biogenesis/stability protei rbh
08E140C01_10kDa_scaffold_602_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25638..26609
DNA (972bp) protein (324aa)
Cro/Cl family transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T0C2_PSEME rbh
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:ERH51544.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
helix-turn-helix domain-containing protein rbh
Displaying items 1-30 of 42 in total

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