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08E140C01_10kDa_scaffold_6626

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_6626_trna_2
unknown

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comp(69..142)
DNA (74bp)
transferRNA
08E140C01_10kDa_scaffold_6626_trna_1
unknown

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comp(155..227)
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_6626_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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434..2758
DNA (2325bp) protein (775aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI000309AC08 rbh
Thymidine phosphorylase {ECO:0000313|EMBL:KJU76301.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein rbh
08E140C01_10kDa_scaffold_6626_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2768..3100
DNA (333bp) protein (111aa)
Pilus assembly protein PilZ n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T3S4_PSEME
Pilus assembly protein PilZ {ECO:0000313|EMBL:ERH53141.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas m
type IV pilus assembly PilZ
08E140C01_10kDa_scaffold_6626_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3222..3401)
DNA (180bp) protein (60aa)
Heme ABC transporter ATP-binding protein n=2 Tax=Pseudomonas RepID=U1SMV2_PSEME
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEB56904.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
08E140C01_10kDa_scaffold_6626_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3398..4810)
DNA (1413bp) protein (471aa)
Heme ABC transporter ATP-binding protein n=2 Tax=Pseudomonas RepID=U1SMV2_PSEME
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERH53140.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
ABC transporter, ATP-binding protein
08E140C01_10kDa_scaffold_6626_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5222..7975
DNA (2754bp) protein (918aa)
diguanylate cyclase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002F48309
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Diguanylate cyclase {ECO:0000313|EMBL:ERH53139.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
08E140C01_10kDa_scaffold_6626_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8062..9267
DNA (1206bp) protein (402aa)
diguanylate cyclase n=1 Tax=Pseudomonas mendocina RepID=UPI00036DDE00
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AEB56903.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
08E140C01_10kDa_scaffold_6626_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9418..10671
DNA (1254bp) protein (418aa)
glyA1; serine hydroxymethyltransferase (EC:2.1.2.1) rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K674_PSEPS rbh
08E140C01_10kDa_scaffold_6626_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10824..11258)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Pseudomonas mendocina RepID=J7U436_PSEME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP83526.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
08E140C01_10kDa_scaffold_6626_9
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11424..11795
DNA (372bp) protein (124aa)
pilus assembly protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00002F4597
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIR
type IV pilus assembly PilZ
08E140C01_10kDa_scaffold_6626_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11799..11945)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T7G8_PSEME
no similarity
No similarity {ECO:0000313|EMBL:CDR89875.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes
08E140C01_10kDa_scaffold_6626_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12129..12608)
DNA (480bp) protein (160aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J1W1_PSEPS
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
08E140C01_10kDa_scaffold_6626_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12608..13432)
DNA (825bp) protein (275aa)
DNA repair protein radA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMU7_PSEME
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas men
DNA repair protein RadA
08E140C01_10kDa_scaffold_6626_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13524..14018
DNA (495bp) protein (165aa)
Acetyltransferase-like protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQA6_PSEMN rbh
acetyltransferase-like protein rbh
Acetyltransferase-like protein {ECO:0000313|EMBL:AEB56898.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
08E140C01_10kDa_scaffold_6626_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14095..14373)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U9Z9_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH53133.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
08E140C01_10kDa_scaffold_6626_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14442..14690)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UDN2_PSEME
Uncharacterized protein {ECO:0000313|EMBL:EZH81634.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
08E140C01_10kDa_scaffold_6626_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14782..15807
DNA (1026bp) protein (342aa)
membrane hemolisin TlyC n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003042B10 rbh
Hemolysin {ECO:0000313|EMBL:EZH81635.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes
membrane hemolisin TlyC rbh
08E140C01_10kDa_scaffold_6626_17
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15808..16491)
DNA (684bp) protein (228aa)
Ferredoxin--NADP reductase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZAZ1_9PSED
Ferredoxin--NADP reductase {ECO:0000313|EMBL:ERI50749.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
ferredoxin-NADP reductase
08E140C01_10kDa_scaffold_6626_18
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17259..17477
DNA (219bp) protein (73aa)
Ribosomal RNA large subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036146}; EC=2.1.1.174 {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036145};; 23S rR
Ribosomal RNA large subunit methyltransferase G n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZSV8_9PSED
hypothetical protein
08E140C01_10kDa_scaffold_6626_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17483..18802)
DNA (1320bp) protein (440aa)
Zn-dependent protease n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U9Z5_PSEME rbh
Zn-dependent protease {ECO:0000313|EMBL:ERH53128.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoci
Protein pmbA homolog rbh
08E140C01_10kDa_scaffold_6626_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18802..19482)
DNA (681bp) protein (227aa)
C69 family peptidase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U426_PSEME rbh
C69 family peptidase
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:ABP83517.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
Displaying 22 items

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