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08E140C01_10kDa_scaffold_1121

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_1121_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..177)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Pseudomonas mendocina RepID=F4DTM3_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP87337.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
08E140C01_10kDa_scaffold_1121_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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352..564
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U817_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH52443.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
08E140C01_10kDa_scaffold_1121_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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561..1340
DNA (780bp) protein (260aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map3; methionine aminopeptidase (EC:3.4.11.18) rbh
Methionine aminopeptidase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T2V5_PSEME rbh
08E140C01_10kDa_scaffold_1121_4
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1294..2856)
DNA (1563bp) protein (521aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI000369A918
08E140C01_10kDa_scaffold_1121_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2810..3394)
DNA (585bp) protein (195aa)
XRE family transcriptional regulator n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FED331
XRE family transcriptional regulator {ECO:0000313|EMBL:KJU75395.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovo
glmR; Glycerol-3-phosphate regulon repressor
08E140C01_10kDa_scaffold_1121_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3468..4079)
DNA (612bp) protein (204aa)
Amino acid transporter LysE n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBN3_PSEME rbh
Amino acid transporter LysE {ECO:0000313|EMBL:ERH52447.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas m
lysine exporter protein LysE/YggA rbh
08E140C01_10kDa_scaffold_1121_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4136..5494)
DNA (1359bp) protein (453aa)
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI00035DC898 rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
glucosamine-1-phosphate N-acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase rbh
08E140C01_10kDa_scaffold_1121_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5618..6052)
DNA (435bp) protein (145aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T2V9_PSEME
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
08E140C01_10kDa_scaffold_1121_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6132..7388)
DNA (1257bp) protein (419aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=2 Tax=Gammaproteobacteria RepID=ATPB_PSEMY
08E140C01_10kDa_scaffold_1121_10
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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7393..7611
DNA (219bp) protein (73aa)
Uncharacterized protein (Fragment) n=1 Tax=Vibrio cholerae HE-45 RepID=J1NA50_VIBCL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIJ70938.1}; Flags: Fragment;; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides
08E140C01_10kDa_scaffold_1121_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7627..8490)
DNA (864bp) protein (288aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14) rbh
ATP synthase gamma chain n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=ATPG_PSEMY rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=330
08E140C01_10kDa_scaffold_1121_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8539..10083)
DNA (1545bp) protein (515aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBN8_PSEME rbh
08E140C01_10kDa_scaffold_1121_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10099..10635)
DNA (537bp) protein (179aa)
atpH; ATP synthase F1, delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U829_PSEME rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
08E140C01_10kDa_scaffold_1121_14
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10648..11118)
DNA (471bp) protein (157aa)
ATP synthase subunit b n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T2W4_PSEME
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase F0 subunit B
08E140C01_10kDa_scaffold_1121_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11205..11432)
DNA (228bp) protein (76aa)
ATP synthase F0 subcomplex C subunit n=3 Tax=Pseudomonas mendocina RepID=A4Y192_PSEMY
F0F1 ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mend
08E140C01_10kDa_scaffold_1121_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11499..12317)
DNA (819bp) protein (273aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14) rbh
ATP synthase subunit a n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T1U9_PSEME rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
08E140C01_10kDa_scaffold_1121_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12342..12731)
DNA (390bp) protein (130aa)
F0F1 ATP synthase subunit I (EC:3.6.3.14)
F0F1 ATP synthase subunit I n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E3DDA2
ATP synthase F0F1 subunit I {ECO:0000313|EMBL:KJU75406.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
08E140C01_10kDa_scaffold_1121_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12862..13605)
DNA (744bp) protein (248aa)
Chromosome partitioning protein ParB n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U834_PSEME
Chromosome partitioning protein ParB {ECO:0000313|EMBL:ERH52458.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
chromosome segregation DNA-binding protein
08E140C01_10kDa_scaffold_1121_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13617..14405)
DNA (789bp) protein (263aa)
Chromosome partitioning protein ParA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T2W9_PSEME rbh
Chromosome partitioning protein {ECO:0000313|EMBL:KJU75408.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/
chromosome segregation ATPase rbh
08E140C01_10kDa_scaffold_1121_20
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14417..15061)
DNA (645bp) protein (215aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SKY5_PSEME rbh
16S rRNA methyltransferase GidB rbh
08E140C01_10kDa_scaffold_1121_21
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15061..16953)
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI000379FB4D rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=633150 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG rbh
08E140C01_10kDa_scaffold_1121_22
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17646..19013)
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
trmE; tRNA modification GTPase mnmE (EC:3.6.-.-)
tRNA modification GTPase TrmE n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002D352F1 rbh
08E140C01_10kDa_scaffold_1121_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19190..20884)
DNA (1695bp) protein (565aa)
Membrane protein insertase YidC n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U836_PSEME rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
putative inner membrane protein translocase component YidC rbh
08E140C01_10kDa_scaffold_1121_24
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20977..21381)
DNA (405bp) protein (135aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J3H1_PSEPS
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
08E140C01_10kDa_scaffold_1121_25
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21395..21529)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=56 Tax=Pseudomonas RepID=RL34_PSE14
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=563797 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
08E140C01_10kDa_scaffold_1121_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21856..23229
DNA (1374bp) protein (458aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T1V6_PSEME
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseu
dnaA; Chromosomal replication initiator protein dnaA
08E140C01_10kDa_scaffold_1121_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23338..24183
DNA (846bp) protein (282aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1390370 species="Bacte
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBQ0_PSEME
08E140C01_10kDa_scaffold_1121_28
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24183..25286
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U841_PSEME
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad
recF; recombination protein F
08E140C01_10kDa_scaffold_1121_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25412..26623
DNA (1212bp) protein (404aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1001585 species="Bacteria; P
DNA gyrase subunit B n=3 Tax=Pseudomonas mendocina RepID=F4DV20_PSEMN
DNA gyrase subunit B
08E140C01_10kDa_scaffold_1121_30
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26562..27416
DNA (855bp) protein (285aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=330 species="Bacteria; Prote
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002EB522A
Displaying items 1-30 of 45 in total

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