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08E140C01_10kDa_scaffold_3872

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_3872_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..162
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DE9734
Uncharacterized protein {ECO:0000313|EMBL:EZH82809.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
08E140C01_10kDa_scaffold_3872_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(261..1157)
DNA (897bp) protein (299aa)
tyrosine recombinase XerD n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003039411 rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
xerD; Tyrosine recombinase xerD rbh
08E140C01_10kDa_scaffold_3872_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1249..1662)
DNA (414bp) protein (138aa)
putative acyl-CoA thioester hydrolase TC_0822 (EC:3.1.2.-)
Uncharacterized acyl-CoA thioester hydrolase TC_0822 n=2 Tax=Pseudomonas aeruginosa group RepID=I7IET1_PSEPS
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:ERH51155.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
08E140C01_10kDa_scaffold_3872_4
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1744..2094)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=5 Tax=Pseudomonas aeruginosa group RepID=RL19_PSEMY
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
50S ribosomal protein L19
08E140C01_10kDa_scaffold_3872_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2091..2795)
DNA (705bp) protein (235aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JM46_PSEPS
trmD; tRNA (guanine-N1)-methyltransferase
08E140C01_10kDa_scaffold_3872_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2801..3337)
DNA (537bp) protein (179aa)
Ribosome maturation factor RimM n=2 Tax=Pseudomonas aeruginosa group RepID=I7J186_PSEPS rbh
rimM; Ribosome maturation factor rimM rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
08E140C01_10kDa_scaffold_3872_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3346..3597)
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=5 Tax=Pseudomonas RepID=RS16_PSEMY
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
08E140C01_10kDa_scaffold_3872_8
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3739..5118)
DNA (1380bp) protein (460aa)
Signal recognition particle protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SH89_PSEME rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo
ffh; Signal recognition 54 kDa protein rbh
08E140C01_10kDa_scaffold_3872_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5234..6076
DNA (843bp) protein (281aa)
Cytochrome c assembly protein n=2 Tax=Pseudomonas mendocina RepID=A4XXT9_PSEMY rbh
cytochrome c assembly protein rbh
Cytochrome c assembly protein {ECO:0000313|EMBL:ABP86155.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" s
08E140C01_10kDa_scaffold_3872_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6337..7212
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DU71_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59760.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
08E140C01_10kDa_scaffold_3872_11
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7184..7918)
DNA (735bp) protein (245aa)
Lysophospholipase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U4C2_PSEME rbh
Lysophospholipase {ECO:0000313|EMBL:KFJ93355.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
lysophospholipase L1 and related esterase-like protein rbh
08E140C01_10kDa_scaffold_3872_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7915..9096)
DNA (1182bp) protein (394aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_0
purT; phosphoribosylglycinamide formyltransferase 2 (EC:2.1.2.2) rbh
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZ86_PSEME rbh
08E140C01_10kDa_scaffold_3872_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9118..9354)
DNA (237bp) protein (79aa)
Uncharacterized protein ydhL n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IET3_PSEPS
putative protein ydhL
Uncharacterized protein {ECO:0000313|EMBL:CDR90296.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
08E140C01_10kDa_scaffold_3872_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9311..9835)
DNA (525bp) protein (175aa)
Carbonic anhydrase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DU75_PSEMN rbh
carbonic anhydrase rbh
Carbonic anhydrase {ECO:0000313|EMBL:AEB59763.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
08E140C01_10kDa_scaffold_3872_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9857..10459)
DNA (603bp) protein (201aa)
NUDIX hydrolase n=2 Tax=Pseudomonas mendocina RepID=F4DU76_PSEMN rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:AEB59764.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (st
08E140C01_10kDa_scaffold_3872_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10609..11163
DNA (555bp) protein (185aa)
NUDIX hydrolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DU77_PSEMN rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:AEB59765.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (st
08E140C01_10kDa_scaffold_3872_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11181..11684
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00002A52E3 rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KJU77536.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovora
putative protein yafK rbh
08E140C01_10kDa_scaffold_3872_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11731..12048)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DU79_PSEMN
NGG1p interacting factor 3 protein, NIF3 {ECO:0000313|EMBL:EZH78593.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomona
hypothetical protein
08E140C01_10kDa_scaffold_3872_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12333..15473)
DNA (3141bp) protein (1047aa)
purL; phosphoribosylformylglycineamide synthetase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DU81_PSEMN
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
08E140C01_10kDa_scaffold_3872_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16044..17444
DNA (1401bp) protein (467aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016};; Murein lyase F {ECO:0000256|HAMAP-Rule:
murein transglycosylase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031BC356 rbh
putative transglycosylase rbh
08E140C01_10kDa_scaffold_3872_21
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17449..17916)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031F9F53
Uncharacterized protein {ECO:0000313|EMBL:KFJ93344.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
hypothetical protein
08E140C01_10kDa_scaffold_3872_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17938..18225)
DNA (288bp) protein (96aa)
cytidine/deoxycytidylate deaminase family protein (EC:3.5.4.26)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadal
CRISPR-associated protein Csn1 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZB3_PSEME
08E140C01_10kDa_scaffold_3872_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18287..19660)
DNA (1374bp) protein (458aa)
copper oxidase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002F62909 rbh
Copper oxidase {ECO:0000313|EMBL:EZH78588.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcalig
multicopper oxidase, type 3 rbh
08E140C01_10kDa_scaffold_3872_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19856..20320
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003770B8C rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP86171.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
08E140C01_10kDa_scaffold_3872_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20323..20835
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00036EA252 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP86172.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
08E140C01_10kDa_scaffold_3872_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20888..22936)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U844_PSEME
Ligand-gated channel {ECO:0000313|EMBL:KJU77521.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcal
ligand-gated channel
Displaying 26 items

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