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08E140C01_10kDa_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_53_1
unknown

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comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

08E140C01_10kDa_scaffold_53_2

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443..1648
DNA (1206bp) protein (402aa)
FAD-dependent oxidoreductase n=1 Tax=Pseudomonas pelagia RepID=UPI0003B790C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN87327.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
puuB; gamma-Glu-putrescine oxidase
08E140C01_10kDa_scaffold_53_3

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1752..2630
DNA (879bp) protein (293aa)
N-carbamoylputrescine amidase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A2A6A4
Uncharacterized protein {ECO:0000313|EMBL:KKN87330.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
N-carbamoylputrescine amidase
08E140C01_10kDa_scaffold_53_4

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2636..3733
DNA (1098bp) protein (366aa)
agmatine deiminase (EC:3.5.3.12)
agmatine deiminase n=1 Tax=Pseudomonas pelagia RepID=UPI00039FFF56 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93980.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_53_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3965..5350
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KNF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZQ20324.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
08E140C01_10kDa_scaffold_53_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5512..6906)
DNA (1395bp) protein (465aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase n=1 Tax=Pseudomonas pelagia RepID=UPI0003AAD911 rbh
argH; argininosuccinate lyase
08E140C01_10kDa_scaffold_53_7

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7259..8341
DNA (1083bp) protein (361aa)
alginate O-acetyltransferase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A2BE9F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93978.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sensory transduction protein kinase AlgZ
08E140C01_10kDa_scaffold_53_8

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8345..9094
DNA (750bp) protein (250aa)
chemotaxis protein CheY n=1 Tax=Pseudomonas pelagia RepID=UPI000399F7C5
Uncharacterized protein {ECO:0000313|EMBL:KKN93977.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LytTR family two component transcriptional regulator
08E140C01_10kDa_scaffold_53_9

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9162..10100
DNA (939bp) protein (313aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
porphobilinogen deaminase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8937D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN87337.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_53_10
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10097..10849
DNA (753bp) protein (251aa)
uroporphyrinogen-III synthase n=1 Tax=Pseudomonas pelagia RepID=UPI00039E0C6D rbh
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CEA04163.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
hemD; uroporphyrinogen-III synthase
08E140C01_10kDa_scaffold_53_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10863..12032
DNA (1170bp) protein (390aa)
uroporphyrin-III C-methyltransferase n=1 Tax=Pseudomonas pelagia RepID=UPI0003B5B32E
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:EZQ19462.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
uroporphyrin-III methyltransferase
08E140C01_10kDa_scaffold_53_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12029..13279
DNA (1251bp) protein (417aa)
heme biosynthesis protein HemY n=1 Tax=Pseudomonas pelagia RepID=UPI00039A79CC
Heme biosynthesis protein HemY {ECO:0000313|EMBL:EZQ19463.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
HemY protein
08E140C01_10kDa_scaffold_53_13

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comp(13297..14265)
DNA (969bp) protein (323aa)
ubiB1; CDP-4-dehydro-6-deoxyglucose reductase (EC:1.17.1.1)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Pseudomonas mendocina RepID=UPI000382E52E
Uncharacterized protein {ECO:0000313|EMBL:KKN93972.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_53_14

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comp(14281..15747)
DNA (1467bp) protein (489aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8960E rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93971.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_53_15

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comp(15920..17185)
DNA (1266bp) protein (422aa)
transcription termination factor Rho n=1 Tax=Pseudomonas pelagia RepID=UPI00039D1278 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93970.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rho; transcription termination factor Rho
08E140C01_10kDa_scaffold_53_16

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comp(17393..17719)
DNA (327bp) protein (109aa)
thioredoxin n=1 Tax=Pseudomonas pelagia RepID=UPI0003A541BC
Uncharacterized protein {ECO:0000313|EMBL:KKN87344.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
trxA; thioredoxin
08E140C01_10kDa_scaffold_53_17

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17872..19377
DNA (1506bp) protein (502aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
exopolyphosphatase n=1 Tax=Pseudomonas pelagia RepID=UPI00039AAFB9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93968.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_53_18

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comp(19356..21569)
DNA (2214bp) protein (738aa)
Polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Pseudomonas pelagia RepID=UPI00039A9FCF rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN87346.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_53_19

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comp(21595..22608)
DNA (1014bp) protein (338aa)
delta-aminolevulinic acid dehydratase n=1 Tax=Pseudomonas pelagia RepID=UPI00039EA35D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93966.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hemB; delta-aminolevulinic acid dehydratase
08E140C01_10kDa_scaffold_53_20

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comp(22675..23907)
DNA (1233bp) protein (411aa)
diguanylate cyclase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A77250 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93965.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
diguanylate cyclase
08E140C01_10kDa_scaffold_53_21

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24145..24708
DNA (564bp) protein (188aa)
thiol-disulfide isomerase n=1 Tax=Pseudomonas pelagia RepID=UPI0003B50071
Uncharacterized protein {ECO:0000313|EMBL:KKN87349.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiol-disulfide isomerase
08E140C01_10kDa_scaffold_53_22

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comp(24751..25197)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A55CBB
Uncharacterized protein {ECO:0000313|EMBL:KKN93964.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
YaiI/YqxD family protein
08E140C01_10kDa_scaffold_53_23
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

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25254..26009
DNA (756bp) protein (252aa)
C-factor n=1 Tax=Pseudomonas pelagia RepID=UPI0003A182DE rbh
putative oxidoreductase Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
hypothetical protein
08E140C01_10kDa_scaffold_53_24

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comp(26013..27932)
DNA (1920bp) protein (640aa)
glutathione ABC transporter ATP-binding protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039F1D67 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN93963.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative ATP-binding component of ABC transporter
08E140C01_10kDa_scaffold_53_25
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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27999..28490
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A715FA
TIGR02444 family protein
Uncharacterized protein {ECO:0000313|EMBL:CEA04134.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1
08E140C01_10kDa_scaffold_53_26

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comp(28515..28964)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039BA423
Uncharacterized protein {ECO:0000313|EMBL:KKN93961.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative CheA signal transduction histidine kinase
08E140C01_10kDa_scaffold_53_27

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comp(28983..29456)
DNA (474bp) protein (158aa)
transcriptional regulator n=1 Tax=Pseudomonas pelagia RepID=UPI0003A6E8ED
Uncharacterized protein {ECO:0000313|EMBL:KKN93960.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anti-RNA polymerase sigma 70 factor
08E140C01_10kDa_scaffold_53_28

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comp(29550..30068)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A1134B rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO08001.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
lipoprotein
08E140C01_10kDa_scaffold_53_29

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comp(30082..30597)
DNA (516bp) protein (172aa)
disulfide bond formation protein DsbB n=1 Tax=Pseudomonas pelagia RepID=UPI00039E0CB8
Uncharacterized protein {ECO:0000313|EMBL:KKN93959.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dsbH; disulfide bond formation protein
08E140C01_10kDa_scaffold_53_30

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comp(30735..31232)
DNA (498bp) protein (166aa)
preprotein translocase subunit SecB n=1 Tax=Pseudomonas pelagia RepID=UPI0003A64B99
Uncharacterized protein {ECO:0000313|EMBL:KKN93958.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
preprotein translocase subunit SecB
Displaying items 1-30 of 109 in total

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