ggKbase home page

08E140C01_10kDa_scaffold_2503

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_2503_1
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)
benzoate transporter
Benzoate membrane transport protein MFS superfamily {ECO:0000313|EMBL:CEG51482.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;
08E140C01_10kDa_scaffold_2503_2
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255..1193)
DNA (939bp) protein (313aa)
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:CEG51481.1}; EC=1.13.11.1 {ECO:0000313|EMBL:CEG51481.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac
3'-RNA processing protein n=3 Tax=Pseudomonas stutzeri subgroup RepID=V4S0F6_PSECO rbh
catechol 1,2-dioxygenase
08E140C01_10kDa_scaffold_2503_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1268..1558)
DNA (291bp) protein (97aa)
Muconolactone Delta-isomerase {ECO:0000256|PIRNR:PIRNR001486}; Short=MIase {ECO:0000256|PIRNR:PIRNR001486};; EC=5.3.3.4 {ECO:0000256|PIRNR:PIRNR001486};; TaxID=316 species="Bacteria; Proteobacteria; G
Muconolactone delta-isomerase n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QAN7_PSECO
muconolactone isomerase
08E140C01_10kDa_scaffold_2503_4
GWC2_Pseudomonadales_63_15_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1574..2695)
DNA (1122bp) protein (374aa)
Muconate cycloisomerase n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QG00_PSECO rbh
muconate cycloisomerase Tax=GWC2_Pseudomonadales_63_15_curated
muconate cycloisomerase rbh
08E140C01_10kDa_scaffold_2503_5
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2725..4068)
DNA (1344bp) protein (448aa)
Major facilitator transporter n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4Q7W7_PSECO rbh
Benzoate transport protein (MFS superfamily) {ECO:0000313|EMBL:CEG51478.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc
benzoate MFS transporter BenK rbh
08E140C01_10kDa_scaffold_2503_6
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4173..4775)
DNA (603bp) protein (201aa)
benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (EC:1.3.1.25)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CSM1_PSEST
Cis-1,2-dihydroxycyclohexa-3, 5-diene-1-carboxylate dehydrogenase,(Cis-1,2-dihydroxy-3, 4-cyclohexadiene-1-carboxylate dehydrogenase) (2-hydro-1,2-dihydroxybenzoate dehydrogenase) (DHB dehydrogenase)
08E140C01_10kDa_scaffold_2503_7
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4989..5999)
DNA (1011bp) protein (337aa)
Benzoate 1,2-dioxygenase electron transfer component {ECO:0000313|EMBL:CEG51476.1}; EC=1.18.1.3 {ECO:0000313|EMBL:CEG51476.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pse
NADH oxidase n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4S0G1_PSECO rbh
NADH oxidase
08E140C01_10kDa_scaffold_2503_8
Pseudomonas sp. BRH_c35, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6010..6498)
DNA (489bp) protein (163aa)
Benzoate 1,2-dioxygenase subunit beta n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CSL9_PSEST rbh
Benzene 1,2-dioxygenase {ECO:0000313|EMBL:KJS29637.1}; TaxID=1629711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. B
benzoate 1,2-dioxygenase subunit beta rbh
08E140C01_10kDa_scaffold_2503_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6498..7859)
DNA (1362bp) protein (454aa)
Benzoate dioxygenase subunit alpha n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CSL8_PSEST rbh
benzoate dioxygenase subunit alpha rbh
Benzoate dioxygenase subunit alpha {ECO:0000313|EMBL:AFM33075.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
08E140C01_10kDa_scaffold_2503_10
Pseudomonas sp. BRH_c35, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8107..9060)
DNA (954bp) protein (318aa)
BenABC operon transcriptional activator BenR n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2V0P8_PSEST rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KJS29635.1}; TaxID=1629711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
AraC family transcriptional regulator
08E140C01_10kDa_scaffold_2503_11
unknown

Not on your lists

comp(9805..9951)
DNA (147bp) protein (49aa)

This feature has no annotations

08E140C01_10kDa_scaffold_2503_12
unknown

Not on your lists

10802..10966
DNA (165bp) protein (55aa)

This feature has no annotations

08E140C01_10kDa_scaffold_2503_13
unknown

Not on your lists

11117..11479
DNA (363bp) protein (121aa)

This feature has no annotations

08E140C01_10kDa_scaffold_2503_14
unknown

Not on your lists

11645..12553
DNA (909bp) protein (303aa)

This feature has no annotations

08E140C01_10kDa_scaffold_2503_15
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12736..13092)
DNA (357bp) protein (119aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM21 RepID=J2NMZ2_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM18866.1}; Flags: Precursor;; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
Displaying 15 items

View Taxonomy