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08E140C01_10kDa_scaffold_916

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_916_1
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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526..1638
DNA (1113bp) protein (371aa)
Fimbrial assembly family protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T159_META2 rbh
fimbrial assembly family protein rbh
Fimbrial assembly family protein {ECO:0000313|EMBL:CCE24590.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Met
08E140C01_10kDa_scaffold_916_2
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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1622..2206
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034BEA7A rbh
general secretion pathway protein M rbh
General secretion pathway protein M {ECO:0000313|EMBL:CCE24589.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="
08E140C01_10kDa_scaffold_916_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2203..2841
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034A9222 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE24588.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
08E140C01_10kDa_scaffold_916_4
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2834..5029
DNA (2196bp) protein (732aa)
general secretion pathway protein D n=1 Tax=Methylomicrobium buryatense RepID=UPI000361DA2D rbh
general secretion pathway protein D rbh
General secretion pathway protein D {ECO:0000313|EMBL:CCE24587.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="
08E140C01_10kDa_scaffold_916_5
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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5300..5752
DNA (453bp) protein (151aa)
NrdR family transcriptional regulator n=1 Tax=Methylomicrobium buryatense RepID=UPI00034CB462
nrdR; transcriptional repressor NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae
08E140C01_10kDa_scaffold_916_6
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5787..6845
DNA (1059bp) protein (353aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T154_META2 rbh
ribD; riboflavin biosynthesis protein RibD rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" sourc
08E140C01_10kDa_scaffold_916_7
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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7039..7695
DNA (657bp) protein (219aa)
Riboflavin synthase alpha chain {ECO:0000313|EMBL:CCE24584.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CCE24584.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylo
riboflavin synthase subunit alpha n=1 Tax=Methylomicrobium buryatense RepID=UPI00034A81F7 rbh
ribC; riboflavin synthase subunit alpha rbh
08E140C01_10kDa_scaffold_916_8
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7696..8811
DNA (1116bp) protein (372aa)
Riboflavin biosynthesis protein ribAB {ECO:0000313|EMBL:CCE24583.1}; EC=3.5.4.25 {ECO:0000313|EMBL:CCE24583.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034A8D16 rbh
ribAB; riboflavin biosynthesis protein RibAB rbh
08E140C01_10kDa_scaffold_916_9
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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9368..9844
DNA (477bp) protein (159aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T151_META2 rbh
ribH; 6,7-dimethyl-8-ribityllumazine synthase rbh
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
08E140C01_10kDa_scaffold_916_10
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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9844..10296
DNA (453bp) protein (151aa)
transcription antitermination protein NusB n=1 Tax=Methylomicrobium buryatense RepID=UPI00034790C9
nusB; N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1091494 species="Bacteria; Prot
08E140C01_10kDa_scaffold_916_11
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10283..11224
DNA (942bp) protein (314aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine monophosphate kinase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034BFB16 rbh
thiL; thiamin-monophosphate kinase rbh
08E140C01_10kDa_scaffold_916_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11205..11717
DNA (513bp) protein (171aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162, ECO:0000313|EMBL:CCE24579.1}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162, ECO:0000313|EMBL:CCE24579.1};; Phosphatidylglycerolphosphate
phosphatidylglycerophosphatase n=1 Tax=Methylomicrobium buryatense RepID=UPI00037280D1 rbh
pgpA; phosphatidylglycerophosphatase A rbh
08E140C01_10kDa_scaffold_916_trna_1
unknown

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12037..12110
DNA (74bp)
transferRNA
08E140C01_10kDa_scaffold_916_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12240..12725
DNA (486bp) protein (162aa)
Ribosome maturation factor RimP n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T3D3_META2 rbh
rimP; ribosome maturation factor rimP rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcacea
08E140C01_10kDa_scaffold_916_14
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12715..14235
DNA (1521bp) protein (507aa)
peptidase M54 n=1 Tax=Methylomicrobium buryatense RepID=UPI0003474A04 rbh
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor) rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methy
08E140C01_10kDa_scaffold_916_15
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14246..16840
DNA (2595bp) protein (865aa)
translation initiation factor IF-2 n=1 Tax=Methylomicrobium buryatense RepID=UPI00035E74FF rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococca
infB; translation initiation factor IF-2 rbh
08E140C01_10kDa_scaffold_916_16
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16845..17207
DNA (363bp) protein (121aa)
ribosome-binding factor A n=1 Tax=Methylomicrobium buryatense RepID=UPI00034BDB91
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Met
08E140C01_10kDa_scaffold_916_17
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17213..18118
DNA (906bp) protein (302aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Methylomicrobium buryatense RepID=UPI000348A65B rbh
truB; tRNA pseudouridine synthase B rbh
Displaying 18 items

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