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08E140C01_scaffold_3351

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_3351_1
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..824
DNA (822bp) protein (274aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI00030EF368
08E140C01_scaffold_3351_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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826..1476
DNA (651bp) protein (217aa)
Putative uncharacterized protein id=2077550 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein; K09765 hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
08E140C01_scaffold_3351_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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1532..2686
DNA (1155bp) protein (385aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II id=2137631 bin=GWE2_Firmicute_51_13 species=Atopobium parvulum genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
class I and II aminotransferase Tax=GWF2_Firmicutes_51_9_curated
08E140C01_scaffold_3351_4
unknown

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2730..3230
DNA (501bp) protein (167aa)

This feature has no annotations

08E140C01_scaffold_3351_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3232..3582
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YA17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67176.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformi
hypothetical protein
08E140C01_scaffold_3351_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(3579..4211)
DNA (633bp) protein (211aa)
Alanine racemase domain protein id=2137623 bin=GWE2_Firmicute_51_13 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
alanine racemase domain-containing protein; K06997 Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
08E140C01_scaffold_3351_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4313..5098
DNA (786bp) protein (262aa)
TIGR02206 family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFG9_9CLOT
TIGR02206 family protein {ECO:0000313|EMBL:EEG29778.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosu
hypothetical protein
08E140C01_scaffold_3351_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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5102..6778
DNA (1677bp) protein (559aa)
Oligo-1,6-glucosidase (EC:3.2.1.10); K01182 oligo-1,6-glucosidase [EC:3.2.1.10] Tax=GWF2_Firmicutes_51_9_curated
Putative uncharacterized protein id=2137618 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
alpha amylase catalytic subunit
08E140C01_scaffold_3351_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6768..7634
DNA (867bp) protein (289aa)
PHP domain protein {ECO:0000313|EMBL:EEF67174.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEF67174.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Hold
PHP domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YA15_9FIRM
putative metal-dependent phosphoesterase
08E140C01_scaffold_3351_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7696..8157
DNA (462bp) protein (154aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEF69353.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEF69353.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotric
Antioxidant, AhpC/TSA family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3W2_9FIRM
hypothetical protein
08E140C01_scaffold_3351_11
Brachyspira hampsonii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

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8157..8522
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=C0QWZ9_BRAHW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELV05791.1}; TaxID=1287056 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hampsonii 30599.;"
08E140C01_scaffold_3351_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(8519..9553)
DNA (1035bp) protein (345aa)
L-allo-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=GWF2_Firmicutes_51_9_curated
threonine aldolase (EC:4.1.2.5)
Putative uncharacterized protein id=2137610 bin=GWE2_Firmicute_51_13 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
08E140C01_scaffold_3351_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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9646..10971
DNA (1326bp) protein (442aa)
Major facilitator superfamily transporter id=2137606 bin=GWE2_Firmicute_51_13 species=Gemella morbillorum genus=Gemella taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
major facilitator superfamily protein Tax=GWF2_Firmicutes_51_9_curated
MFS transporter
08E140C01_scaffold_3351_14
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10986..11864
DNA (879bp) protein (293aa)
Peptidase U32 family n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G570_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDE22574.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium do
Collagenase and related proteases
08E140C01_scaffold_3351_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11861..12364
DNA (504bp) protein (168aa)
Peptidase, U32 family {ECO:0000313|EMBL:EEF67239.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEF67239.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; H
Peptidase, U32 family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9W6_9FIRM
peptidase U32
Displaying 15 items

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